RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 MYMKA6NI61 221 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 ADAM12O43184 909 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 CXCL8P10145 99 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 TKTP29401 623 aaKnown RBP27.64■■■□□ 2.02
PVT1-201ENST00000504719 RPL9P32969 192 aaKnown RBP27.64■■■□□ 2.02
PVT1-201ENST00000504719 STAT6P42226 847 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 NUCB2P80303 420 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 KYAT1Q16773 422 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 SLC39A4Q6P5W5 647 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 MAP4K3Q8IVH8 894 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 ZNF707Q96C28 371 aaPredicted RBP27.64■■■□□ 2.02
PVT1-201ENST00000504719 MTRRQ9UBK8 725 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 FBXW11Q9UKB1 542 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 HCN4Q9Y3Q4 1203 aa27.64■■■□□ 2.02
PVT1-201ENST00000504719 TTC26A0AVF1 554 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 I3L4J1 428 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 OGTO15294 1046 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 FAM189A1O60320 539 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 TNFSF9P41273 254 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 ZC2HC1CQ53FD0 456 aaPredicted RBP27.63■■■□□ 2.01
PVT1-201ENST00000504719 HFE2Q6ZVN8 426 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 LEO1Q8WVC0 666 aaPredicted RBP27.63■■■□□ 2.01
PVT1-201ENST00000504719 SMG7Q92540 1137 aaKnown RBP27.63■■■□□ 2.01
PVT1-201ENST00000504719 DNAJC19Q96DA6 116 aa27.63■■■□□ 2.01
PVT1-201ENST00000504719 WDR6Q9NNW5 1121 aaKnown RBP27.63■■■□□ 2.01
PVT1-201ENST00000504719 A0A0B4J269 797 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 TMEM221A6NGB7 291 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 M0R296 226 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 ZMYND10O75800 440 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 SIGLEC14Q08ET2 396 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 OTOP3Q7RTS5 596 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 ZNF720Q7Z2F6 126 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 SFR1Q86XK3 245 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 ACSF2Q96CM8 615 aaPredicted RBP27.62■■■□□ 2.01
PVT1-201ENST00000504719 SPATA32Q96LK8 384 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 PRKD2Q9BZL6 878 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 BACE2Q9Y5Z0 518 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 DOCK6Q96HP0 2047 aa27.62■■■□□ 2.01
PVT1-201ENST00000504719 ANP32AP39687 249 aaKnown RBP27.61■■■□□ 2.01
PVT1-201ENST00000504719 RAB33AQ14088 237 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 ZBTB41Q5SVQ8 909 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 RSPO2Q6UXX9 243 aaPredicted RBP27.61■■■□□ 2.01
PVT1-201ENST00000504719 ANKS3Q6ZW76 656 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 BMP8AQ7Z5Y6 402 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 SEL1LQ9UBV2 794 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 TUBGCP4Q9UGJ1 667 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 LIMD1Q9UGP4 676 aa27.61■■■□□ 2.01
PVT1-201ENST00000504719 ANK1P16157 1881 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 LACTBL1A8MY62 500 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 ADRB2P07550 413 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 OR1D2P34982 312 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 PPP2R3AQ06190 1150 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 SPAG1Q07617 926 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 ZBTB6Q15916 424 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 KIF12Q96FN5 646 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 MSTO1Q9BUK6 570 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 RPF1Q9H9Y2 349 aaKnown RBP27.6■■■□□ 2.01
PVT1-201ENST00000504719 SORCS3Q9UPU3 1222 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 ARIH1Q9Y4X5 557 aaPredicted RBP27.6■■■□□ 2.01
PVT1-201ENST00000504719 NUB1Q9Y5A7 615 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 CLUHO75153 1309 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 DOCK8Q8NF50 2099 aa27.6■■■□□ 2.01
PVT1-201ENST00000504719 ANKRD63C9JTQ0 380 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 SYN3O14994 580 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 PPP1R37O75864 691 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 GAP43P17677 238 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 ENOX2Q16206 610 aaKnown RBP27.59■■■□□ 2.01
PVT1-201ENST00000504719 RESP18Q5W5W9 173 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 HVCN1Q96D96 273 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 STRA6Q9BX79 667 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 PIDD1Q9HB75 910 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 CPSF3Q9UKF6 684 aaKnown RBP27.59■■■□□ 2.01
PVT1-201ENST00000504719 CDY1Q9Y6F8 540 aa27.59■■■□□ 2.01
PVT1-201ENST00000504719 ASGR2P07307 311 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 CYP3A5P20815 502 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 LRPAP1P30533 357 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 E2F4Q16254 413 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 VARS2Q5ST30 1063 aaKnown RBP27.58■■■□□ 2.01
PVT1-201ENST00000504719 LIN9Q5TKA1 542 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 TMEM130Q8N3G9 435 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 STAMQ92783 540 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 DHX58Q96C10 678 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 ASIC4Q96FT7 647 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 SUSD3Q96L08 255 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 MFSD14AQ96MC6 490 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 TSPAN18Q96SJ8 248 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 SCAND2PQ9GZW5 306 aaPredicted RBP27.58■■■□□ 2.01
PVT1-201ENST00000504719 FAM13BQ9NYF5 915 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 UBQLN1Q9UMX0 589 aaKnown RBP27.58■■■□□ 2.01
PVT1-201ENST00000504719 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.58■■■□□ 2.01
PVT1-201ENST00000504719 STYXL1Q9Y6J8 313 aa27.58■■■□□ 2.01
PVT1-201ENST00000504719 N4BP1O75113 896 aaKnown RBP27.57■■■□□ 2
PVT1-201ENST00000504719 C8AP07357 584 aa27.57■■■□□ 2
PVT1-201ENST00000504719 HNRNPA1P09651 372 aaKnown RBP eCLIP27.57■■■□□ 2
PVT1-201ENST00000504719 MTMR3Q13615 1198 aa27.57■■■□□ 2
PVT1-201ENST00000504719 SLFN12LQ6IEE8 588 aa27.57■■■□□ 2
PVT1-201ENST00000504719 UBALD2Q8IYN6 164 aa27.57■■■□□ 2
PVT1-201ENST00000504719 PBXIP1Q96AQ6 731 aa27.57■■■□□ 2
PVT1-201ENST00000504719 MRPL44Q9H9J2 332 aaKnown RBP27.57■■■□□ 2
PVT1-201ENST00000504719 FRMD3A2A2Y4 597 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms