RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 CAGE1Q8TC20 777 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 WNT8BQ93098 351 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 SNX27Q96L92 541 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 C16orf45Q96MC5 204 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 KREMEN1Q96MU8 473 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 IFIH1Q9BYX4 1025 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 FAM124BQ9H5Z6 455 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 CNTN3Q9P232 1028 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 KRT86O43790 486 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 KIF5CO60282 957 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 CLSTN1O94985 981 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 NFICP08651 508 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 TNNT1P13805 278 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 BPIFB4P59827 614 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 PTK2Q05397 1052 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 PAK2Q13177 524 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 CUL2Q13617 745 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 UBXN11Q5T124 520 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 JADE1Q6IE81 842 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 TMEM192Q8IY95 271 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 TRAIPQ9BWF2 469 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 EIF2AQ9BY44 585 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 TRMT13Q9NUP7 481 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 ST3GAL5Q9UNP4 418 aa12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 REXO2Q9Y3B8 237 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-210ENST00000504677 RECQL4O94761 1208 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 P4HA1P13674 534 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 CAPN2P17655 700 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 MAGEA1P43355 309 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 PDE6CP51160 858 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 ETF1P62495 437 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 GFPT1Q06210 699 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 KIF5AQ12840 1032 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 BFSP2Q13515 415 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 FBXO46Q6PJ61 603 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 ZNF571Q7Z3V5 609 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 ZNF677Q86XU0 584 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 TATDN2Q93075 761 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 DEFB118Q96PH6 123 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 NXF3Q9H4D5 531 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 ERVK-5Q9HDB9 667 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 UBQLN1Q9UMX0 589 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 IPPQ9Y573 584 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 PCDHA13Q9Y5I0 950 aa12.83□□□□□ -0.36
POLR2J3-210ENST00000504677 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 PJA2O43164 708 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 CD4P01730 458 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 CKBP12277 381 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 SKIP12755 728 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 KCNE1P15382 129 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 CDK7P50613 346 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 MYL6P60660 151 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 RBP5P82980 135 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 NFX1Q12986 1120 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 XKR4Q5GH76 650 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 ZNF667Q5HYK9 610 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 ALKAL1Q6UXT8 129 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 TTC39CQ8N584 583 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 DNAJC5GQ8N7S2 189 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 KAT5Q92993 513 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 SYT11Q9BT88 431 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 XYLT2Q9H1B5 865 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 APOBEC3GQ9HC16 384 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 FAM105AQ9NUU6 356 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 ADAMTS1Q9UHI8 967 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 INTUQ9ULD6 942 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 NUB1Q9Y5A7 615 aa12.82□□□□□ -0.36
POLR2J3-210ENST00000504677 A0A087X0T9 212 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 ZNF263O14978 683 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 ITGB3P05106 788 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 KRT19P08727 400 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 FAM228BP0C875 321 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 GHRP10912 638 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 KRT5P13647 590 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 ATF7P17544 494 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 CYP3A5P20815 502 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 TNFAIP3P21580 790 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 USP8P40818 1118 aa12.81□□□□□ -0.36
POLR2J3-210ENST00000504677 ARHGAP25P42331 645 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms