RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 HPS3Q969F9 1004 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 DDX27Q96GQ7 796 aaKnown RBP15.52■□□□□ 0.08
HOXC9-202ENST00000504557 NECTIN4Q96NY8 510 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 CLSTN3Q9BQT9 956 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 FGFBP2Q9BYJ0 223 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 PIDD1Q9HB75 910 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 FNIP2Q9P278 1114 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 CFAP45Q9UL16 551 aa15.52■□□□□ 0.08
HOXC9-202ENST00000504557 MORC2Q9Y6X9 1032 aaPredicted RBP15.52■□□□□ 0.08
HOXC9-202ENST00000504557 A0A0B4J269 797 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 C2CD4DB7Z1M9 353 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 TMEM189-UBE2V1I3L0A0 370 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 POLR2DO15514 142 aaKnown RBP15.51■□□□□ 0.07
HOXC9-202ENST00000504557 CASP1P29466 404 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 OR1D2P34982 312 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 ASIC1P78348 528 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 ENOX2Q16206 610 aaKnown RBP15.51■□□□□ 0.07
HOXC9-202ENST00000504557 AXDND1Q5T1B0 1012 aaPredicted RBP15.51■□□□□ 0.07
HOXC9-202ENST00000504557 GPR149Q86SP6 731 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 CCDC65Q8IXS2 484 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 KREMEN2Q8NCW0 462 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 SMG7Q92540 1137 aaKnown RBP15.51■□□□□ 0.07
HOXC9-202ENST00000504557 ACCSQ96QU6 501 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 SEL1LQ9UBV2 794 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 AGO2Q9UKV8 859 aaKnown RBP15.51■□□□□ 0.07
HOXC9-202ENST00000504557 NR2E1Q9Y466 385 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
HOXC9-202ENST00000504557 TTC26A0AVF1 554 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 PRPF6O94906 941 aaKnown RBP15.5■□□□□ 0.07
HOXC9-202ENST00000504557 NFICP08651 508 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 SCP2P22307 547 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 FGFR3P22607 806 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 ABCD1P33897 745 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 AFMP43652 599 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 E2F4Q16254 413 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
HOXC9-202ENST00000504557 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 JADE1Q6IE81 842 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 CCDC149Q6ZUS6 474 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 IQUBQ8NA54 791 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 TDRD5Q8NAT2 981 aaKnown RBP15.5■□□□□ 0.07
HOXC9-202ENST00000504557 SAAL1Q96ER3 474 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 LRFN3Q9BTN0 628 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 BLZF1Q9H2G9 400 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 TNMDQ9H2S6 317 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 C11orf16Q9NQ32 467 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 DPP7Q9UHL4 492 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 POLIQ9UNA4 740 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 ZDHHC9Q9Y397 364 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 DOCK8Q8NF50 2099 aa15.5■□□□□ 0.07
HOXC9-202ENST00000504557 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 FAM189A1O60320 539 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 COL9A1P20849 921 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 RPL9P32969 192 aaKnown RBP15.49■□□□□ 0.07
HOXC9-202ENST00000504557 KYAT1Q16773 422 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 VARS2Q5ST30 1063 aaKnown RBP15.49■□□□□ 0.07
HOXC9-202ENST00000504557 SLFN12LQ6IEE8 588 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 PDXDC1Q6P996 788 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 RSPO2Q6UXX9 243 aaPredicted RBP15.49■□□□□ 0.07
HOXC9-202ENST00000504557 GRAMD1CQ8IYS0 662 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 GLIS3Q8NEA6 775 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 HVCN1Q96D96 273 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 SPATA32Q96LK8 384 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 FAM213AQ9BRX8 229 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 LRRC27Q9C0I9 530 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 ST6GALNAC4Q9H4F1 302 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 PCIF1Q9H4Z3 704 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 PLEKHA5Q9HAU0 1116 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 CPSF3Q9UKF6 684 aaKnown RBP15.49■□□□□ 0.07
HOXC9-202ENST00000504557 UBQLN1Q9UMX0 589 aaKnown RBP15.49■□□□□ 0.07
HOXC9-202ENST00000504557 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
HOXC9-202ENST00000504557 TIMM13Q9Y5L4 95 aaPredicted RBP15.49■□□□□ 0.07
HOXC9-202ENST00000504557 TECTAO75443 2155 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 PPEF2O14830 753 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 CCL16O15467 120 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 XPOTO43592 962 aaKnown RBP15.48■□□□□ 0.07
HOXC9-202ENST00000504557 PPP1R37O75864 691 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 ASGR2P07307 311 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 GBP2P32456 591 aaPredicted RBP15.48■□□□□ 0.07
HOXC9-202ENST00000504557 KRT85P78386 507 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 AMPD3Q01432 767 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 BECN1Q14457 450 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 TMEM132DQ14C87 1099 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 PPM1LQ5SGD2 360 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 RESP18Q5W5W9 173 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 ATL3Q6DD88 541 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 DSTYKQ6XUX3 929 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 ANKS3Q6ZW76 656 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 ZSWIM2Q8NEG5 633 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 SLC7A14Q8TBB6 771 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 TRIM9Q9C026 710 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 CUEDC2Q9H467 287 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 PLEKHA4Q9H4M7 779 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 KBTBD4Q9NVX7 518 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 MTRRQ9UBK8 725 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 LIMD1Q9UGP4 676 aa15.48■□□□□ 0.07
HOXC9-202ENST00000504557 A0A1B0GVL5 298 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms