RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CASTOR2A6NHX0 329 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 ANHXE9PGG2 379 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 CCL16O15467 120 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 REC8O95072 547 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 EFEMP2O95967 443 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 NEFLP07196 543 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 C8AP07357 584 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
DHFR-202ENST00000504396 PTENP60484 403 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
DHFR-202ENST00000504396 EPHA7Q15375 998 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 MLF2Q15773 248 aaPredicted RBP10.04□□□□□ -0.8
DHFR-202ENST00000504396 PPP4R3AQ6IN85 833 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 PIK3AP1Q6ZUJ8 805 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 MTSS1LQ765P7 747 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 FGF14Q92915 247 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 BORCS6Q96GS4 357 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 KXD1Q9BQD3 176 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
DHFR-202ENST00000504396 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 KCNMB3Q9NPA1 279 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 CHST7Q9NS84 486 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 DLGAP2Q9P1A6 1054 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 FNIP2Q9P278 1114 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 CDH7Q9ULB5 785 aa10.04□□□□□ -0.8
DHFR-202ENST00000504396 ZFP37Q9Y6Q3 630 aaPredicted RBP10.04□□□□□ -0.8
DHFR-202ENST00000504396 KANSL1LA0AUZ9 987 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 ZBTB39O15060 712 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 B4GALT5O43286 388 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 XYLBO75191 536 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
DHFR-202ENST00000504396 GLULP15104 373 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 XBP1P17861 261 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 MBTD1Q05BQ5 628 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 CAPSQ13938 189 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 HSP90AA2PQ14568 343 aaPredicted RBP10.03□□□□□ -0.8
DHFR-202ENST00000504396 PSMD5Q16401 504 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 RTP2Q5QGT7 225 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 FAM171A1Q5VUB5 890 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 SLC27A1Q6PCB7 646 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 CCDC116Q8IYX3 515 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 ASAP3Q8TDY4 903 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 ZNF274Q96GC6 653 aaPredicted RBP10.03□□□□□ -0.8
DHFR-202ENST00000504396 KCTD15Q96SI1 283 aaPredicted RBP10.03□□□□□ -0.8
DHFR-202ENST00000504396 TTPALQ9BTX7 342 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 PHF20Q9BVI0 1012 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 FBXW11Q9UKB1 542 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
DHFR-202ENST00000504396 PATJQ8NI35 1801 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
DHFR-202ENST00000504396 LRRIQ4A6NIV6 560 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 FAM170BA6NMN3 283 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 CDKL5O76039 1030 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 HNRNPA1P09651 372 aaKnown RBP eCLIP10.02□□□□□ -0.81
DHFR-202ENST00000504396 LIG1P18858 919 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 CD72P21854 359 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 STARD6P59095 220 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 PFKPQ01813 784 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 NPY5RQ15761 445 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 SLC44A4Q53GD3 710 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 MRPL14Q6P1L8 145 aaKnown RBP10.02□□□□□ -0.81
DHFR-202ENST00000504396 RUFY3Q7L099 469 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 MAEAQ7L5Y9 396 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 SLFN12Q8IYM2 578 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 SLC7A14Q8TBB6 771 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 ING5Q8WYH8 240 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 FGF13Q92913 245 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 PAAF1Q9BRP4 392 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 NFKBIZQ9BYH8 718 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 POLR3FQ9H1D9 316 aaPredicted RBP10.02□□□□□ -0.81
DHFR-202ENST00000504396 XPNPEP1Q9NQW7 623 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 CDV3Q9UKY7 258 aaKnown RBP10.02□□□□□ -0.81
DHFR-202ENST00000504396 USP18Q9UMW8 372 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 MTF2Q9Y483 593 aaPredicted RBP10.02□□□□□ -0.81
DHFR-202ENST00000504396 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
DHFR-202ENST00000504396 DMXL1Q9Y485 3027 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 USO1O60763 962 aaKnown RBP10.01□□□□□ -0.81
DHFR-202ENST00000504396 KIF4AO95239 1232 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 PRKCQQ04759 706 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 TUSC3Q13454 348 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 TOB2Q14106 344 aaPredicted RBP10.01□□□□□ -0.81
DHFR-202ENST00000504396 PABPC1LQ4VXU2 614 aaKnown RBP10.01□□□□□ -0.81
DHFR-202ENST00000504396 ZBTB41Q5SVQ8 909 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 LILRA6Q6PI73 481 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 TPRG1Q6ZUI0 275 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
DHFR-202ENST00000504396 SUMF1Q8NBK3 374 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 ITFG1Q8TB96 612 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 HAS1Q92839 578 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 CNTNAP3Q9BZ76 1288 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 LTB4R2Q9NPC1 389 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 HCFC1R1Q9NWW0 138 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 DLL3Q9NYJ7 618 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 FBXO4Q9UKT5 387 aa10.01□□□□□ -0.81
DHFR-202ENST00000504396 SMG5Q9UPR3 1016 aaKnown RBP10.01□□□□□ -0.81
DHFR-202ENST00000504396 NCAM2O15394 837 aa10□□□□□ -0.81
DHFR-202ENST00000504396 LYPLA2O95372 231 aa10□□□□□ -0.81
DHFR-202ENST00000504396 THP07101 528 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms