RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GABBR2O75899 941 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TNNI1P19237 187 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MAPKAPK2P49137 400 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 ZCWPW2Q504Y3 356 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 PDPK2PQ6A1A2 396 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 LNX2Q8N448 690 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 ESX1Q8N693 406 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 OR6P1Q8NGX9 317 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC74AQ96AQ1 378 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 PDLIM2Q96JY6 352 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TTPALQ9BTX7 342 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 VPS33BQ9H267 617 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MCM9Q9NXL9 1143 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SAGE1Q9NXZ1 904 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SLC39A1Q9NY26 324 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 FAM135AQ9P2D6 1515 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TIAM1Q13009 1591 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 DEAF1O75398 565 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MBP02144 154 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MAPK4P31152 587 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 NUP107P57740 925 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 ABATP80404 500 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 DPYSQ14117 519 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SPOPLQ6IQ16 392 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 KRT26Q7Z3Y9 468 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SETD3Q86TU7 594 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CTAGE3PQ8IX95 158 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SUPT20HQ8NEM7 779 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 KRT35Q92764 455 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF717Q9BY31 904 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 PAG1Q9NWQ8 432 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CTNNAL1Q9UBT7 734 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 DAPK2Q9UIK4 370 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 IBTKQ9P2D0 1353 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 KDM2BQ8NHM5 1336 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 DNAJB5O75953 348 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CACNB3P54284 484 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TRIM32Q13049 653 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 PKN1Q16512 942 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 USP39Q53GS9 565 aaKnown RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CHD1LQ86WJ1 897 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 ERICH1Q86X53 443 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 OR52K2Q8NGK3 314 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 VANGL1Q8TAA9 524 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SUCLG2Q96I99 432 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 METTL21EPA6NDL7 271 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ATP9BO43861 1147 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 GAS7O60861 476 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 FBXO21O94952 628 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 MOCS3O95396 460 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ATP5F1P24539 256 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 CAPZA1P52907 286 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 EPM2AIP1Q7L775 607 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 R3HCC1LQ7Z5L2 792 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 MAB21L3Q8N8X9 362 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 HERVK_113Q902F9 699 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 LRRC39Q96DD0 335 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 SLC29A1Q99808 456 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ANKRD2Q9GZV1 360 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 DNAJC18Q9H819 358 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 SEPT3Q9UH03 358 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 UHRF1BP1LA0JNW5 1464 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 NCOA2Q15596 1464 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ANKRD50Q9ULJ7 1429 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TMEM120BA0PK00 339 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 GPR89AB7ZAQ6 455 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 PRSS44E7EML9 344 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 GIPC1O14908 333 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 GPR89BP0CG08 455 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 HSPA13P48723 471 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ARHGAP4P98171 946 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 EZH2Q15910 746 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ANKMY2Q8IV38 441 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 OR7G1Q8NGA0 311 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 STK32AQ8WU08 396 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 LURAP1Q96LR2 239 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 CDADC1Q9BWV3 514 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 CAB39LQ9H9S4 337 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 L3MBTL1Q9Y468 752 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 MSH6P52701 1360 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TTC41PQ6P2S7 1318 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 MYPNQ86TC9 1320 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ANKRD36BQ8N2N9 1353 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 A0A087WZG4 1122 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TMEM114B3SHH9 223 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TLR3O15455 904 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ASAP2O43150 1006 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 PDE9AO76083 593 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 DIO1P49895 249 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 VAV2P52735 878 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 PRKG2Q13237 762 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 SPARCL1Q14515 664 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 SMCO1Q147U7 214 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TBCCQ15814 346 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF792Q3KQV3 632 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 GPATCH4Q5T3I0 446 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 METTL21CQ5VZV1 264 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms