RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TIPINQ9BVW5 301 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 VTA1Q9NP79 307 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 SEPT10Q9P0V9 454 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 CTNNAL1Q9UBT7 734 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 PCSK1NQ9UHG2 260 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 B4GALT4O60513 344 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 SERPINB7O75635 380 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 OXSR1O95747 527 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 HMGCRP04035 888 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 CYBAP13498 195 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 ICAM3P32942 547 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 PCK1P35558 622 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 ETV3P41162 512 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 GPC3P51654 580 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 PDE4DQ08499 809 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 ORC2Q13416 577 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 DAB2IPQ5VWQ8 1189 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 KLC3Q6P597 504 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 TMEM151BQ8IW70 566 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 ATRIPQ8WXE1 791 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 LENG9Q96B70 501 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 NAP1L4Q99733 375 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 B3GNT4Q9C0J1 378 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 MIS12Q9H081 205 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 MRGBPQ9NV56 204 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 IP6K2Q9UHH9 426 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 LUC7L2Q9Y383 392 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 SQORQ9Y6N5 450 aa10.24□□□□□ -0.77
PDLIM5-207ENST00000503974 C5orf60A6NFR6 353 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 FAM86B1E9PN63 330 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 MEIS1O00470 390 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 WNT7AO00755 349 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 TSPAN1O60635 241 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 DGKIO75912 1065 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 PDHA1P08559 390 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 FAM86B2P0C5J1 330 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 SPATA31D3P0C874 917 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 ITGB5P18084 799 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 TOB1P50616 345 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 CEP55Q53EZ4 464 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 RILPL1Q5EBL4 403 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 WDR45BQ5MNZ6 344 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 CFAP58Q5T655 872 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 IRGCQ6NXR0 463 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 TAPT1Q6NXT6 567 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 FBXO46Q6PJ61 603 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 SPATA31D4Q6ZUB0 917 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 FERMT3Q86UX7 667 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 LURAP1LQ8IV03 231 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 TMEM139Q8IV31 216 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 SIX5Q8N196 739 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 HAUS1Q96CS2 278 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 GPRASP2Q96D09 838 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 CCDC42Q96M95 316 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 MXRA8Q9BRK3 442 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 SELENOOQ9BVL4 669 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 TSC22D4Q9Y3Q8 395 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 ZNF711Q9Y462 761 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 NOX1Q9Y5S8 564 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 FRMPD3Q5JV73 1810 aa10.23□□□□□ -0.77
PDLIM5-207ENST00000503974 A0A0B4J203 849 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ZNF865P0CJ78 1059 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 MYCLP12524 364 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ELNP15502 786 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 GRK4P32298 578 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 MDH1P40925 334 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ACADSBP45954 432 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ZNF131P52739 623 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ADARP55265 1226 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 TUBA4AP68366 448 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 GUCY1A3Q02108 690 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 MFSD14CQ5VZR4 134 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 FIP1L1Q6UN15 594 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 MAP7D3Q8IWC1 876 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 MLKLQ8NB16 471 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 GSDMBQ8TAX9 411 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ANKRD49Q8WVL7 239 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ARL8AQ96BM9 186 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 SEC16BQ96JE7 1060 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 NDEL1Q9GZM8 345 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ETNK2Q9NVF9 386 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 IFNKQ9P0W0 207 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 SCOCQ9UIL1 159 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 SLC12A4Q9UP95 1085 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 KCNJ13O60928 360 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 TDP2O95551 362 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ACADSP16219 412 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 GNAZP19086 355 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 TKTP29401 623 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 BIRC3Q13489 604 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 ACVR2BQ13705 512 aa10.22□□□□□ -0.77
PDLIM5-207ENST00000503974 SPIDRQ14159 915 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms