RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 ZNF189O75820 626 aaPredicted RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 CYP11B1P15538 503 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 SESN3P58005 492 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 CUL2Q13617 745 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 GPR162Q16538 588 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 CBWD2Q8IUF1 395 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 AENQ8WTP8 325 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 RBM15Q96T37 977 aaKnown RBP eCLIP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 MYCBPQ99417 103 aaPredicted RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 TMBIM4Q9HC24 238 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 HACL1Q9UJ83 578 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 MAP2K7O14733 419 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 GAS2O43903 313 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 HUS1O60921 280 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 TXNP10599 105 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 GNAT1P11488 350 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 KPNA2P52292 529 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 PI4K2AQ9BTU6 479 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 SAT1P21673 171 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 LONRF1Q17RB8 773 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 CRLF3Q8IUI8 442 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 RIBC1Q8N443 379 aaPredicted RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 FEZF2Q8TBJ5 459 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 SLC16A10Q8TF71 515 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
LIMCH1-205ENST00000503057 SLC25A27O95847 323 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 ESRRAP11474 423 aaPredicted RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 TM4SF1P30408 202 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 HNRNPH3P31942 346 aaKnown RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 NAMPTP43490 491 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 AARSP49588 968 aaKnown RBP eCLIP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 BCAR1P56945 870 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 ZNF449Q6P9G9 518 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 CYP2W1Q8TAV3 490 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 SYTL5Q8TDW5 730 aaPredicted RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 MAML1Q92585 1016 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 TTC17Q96AE7 1141 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 MMTAG2Q9BU76 263 aaKnown RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 MLXIPLQ9NP71 852 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 KLHL11Q9NVR0 708 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 APOL1O14791 398 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 BAG2O95816 211 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 LMNAP02545 664 aaKnown RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 GLI1P08151 1106 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 CDH6P55285 790 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 EIF3EP60228 445 aaKnown RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 HYIQ5T013 277 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 ZFPM1Q8IX07 1006 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 TLK1Q9UKI8 766 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 A0A0U1RQJ8 604 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 SMAPO00193 183 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 NFIBO00712 420 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 TNFRSF8P28908 595 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 MICAL1Q8TDZ2 1067 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 KIF12Q96FN5 646 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 LRRC37BQ96QE4 947 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 ECT2Q9H8V3 914 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 OSGEPQ9NPF4 335 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 ZFP69BQ9UJL9 534 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 NEU2Q9Y3R4 380 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 PCDHGC5Q9Y5F6 944 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 PFDN6O15212 129 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 LPXNO60711 386 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 ITGA8P53708 1063 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 BACE1P56817 501 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 CYP24A1Q07973 514 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 PGM5Q15124 567 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 SPATA21Q7Z572 469 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 MSL3Q8N5Y2 521 aaKnown RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 SEC16BQ96JE7 1060 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 FGFR1OP2Q9NVK5 253 aa11.38□□□□□ -0.59
LIMCH1-205ENST00000503057 BTNL10A8MVZ5 291 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 PI4K2BG5E9Z4 385 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 MEIS2O14770 477 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 SUPT20HL2P0C7V6 817 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 ATF7IP2Q5U623 682 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 HEATR6Q6AI08 1181 aaKnown RBP11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 CERS5Q8N5B7 392 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 FAM96AQ9H5X1 160 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 ARL2BPQ9Y2Y0 163 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 A0A0G2JND7 137 aa11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 NOL3O60936 208 aaKnown RBP11.37□□□□□ -0.59
LIMCH1-205ENST00000503057 VCAM1P19320 739 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms