RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 GRM5P41594 1212 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 BRCC3P46736 316 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 SMTNP53814 917 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 RAB33AQ14088 237 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 UPP1Q16831 310 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 ANKS3Q6ZW76 656 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 NKD2Q969F2 451 aaPredicted RBP11.75□□□□□ -0.53
SNCA-207ENST00000502987 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
SNCA-207ENST00000502987 KIF2CQ99661 725 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 RUSC1Q9BVN2 902 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 CDT1Q9H211 546 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 TBC1D17Q9HA65 648 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 CDH7Q9ULB5 785 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 NUB1Q9Y5A7 615 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 NUMBLQ9Y6R0 609 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 CACNA1HO95180 2353 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 KRBA1A5PL33 1030 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 VWA3AA6NCI4 1184 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 PRRG1O14668 218 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 LRG1P02750 347 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 MCF2P10911 925 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 IGFBP6P24592 240 aaPredicted RBP11.74□□□□□ -0.53
SNCA-207ENST00000502987 PRPHP41219 470 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 HTR4Q13639 388 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 RABEP1Q15276 862 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 ANGPT1Q15389 498 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 IL17AQ16552 155 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 UVSSAQ2YD98 709 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
SNCA-207ENST00000502987 RILPL1Q5EBL4 403 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 MPZL3Q6UWV2 235 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 MTSS1LQ765P7 747 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 CCDC105Q8IYK2 499 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 FGF13Q92913 245 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 BICD1Q96G01 975 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 ZBTB45Q96K62 511 aaPredicted RBP11.74□□□□□ -0.53
SNCA-207ENST00000502987 C17orf75Q9HAS0 396 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
SNCA-207ENST00000502987 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
SNCA-207ENST00000502987 ANKFY1Q9P2R3 1169 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 MTRRQ9UBK8 725 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 KCNG1Q9UIX4 513 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 MRPS23Q9Y3D9 190 aaKnown RBP11.74□□□□□ -0.53
SNCA-207ENST00000502987 SIT1Q9Y3P8 196 aa11.74□□□□□ -0.53
SNCA-207ENST00000502987 MYO15AQ9UKN7 3530 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 ANHXE9PGG2 379 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 H7C4K7 107 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 TMEM189-UBE2V1I3L0A0 370 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 PODXLO00592 558 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 DCNP07585 359 aaKnown RBP11.73□□□□□ -0.53
SNCA-207ENST00000502987 GJB2P29033 226 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 MARCKSP29966 332 aaPredicted RBP11.73□□□□□ -0.53
SNCA-207ENST00000502987 HOXA9P31269 272 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 NBL1P41271 181 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 GPC5P78333 572 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
SNCA-207ENST00000502987 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 SEZ6Q53EL9 994 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 PARM1Q6UWI2 310 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
SNCA-207ENST00000502987 C1orf186Q6ZWK4 172 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 ASCL5Q7RTU5 278 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 DAW1Q8N136 415 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 C3orf58Q8NDZ4 430 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 ITFG1Q8TB96 612 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 FGF14Q92915 247 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 SHDQ96IW2 340 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 RPP25Q9BUL9 199 aaKnown RBP11.73□□□□□ -0.53
SNCA-207ENST00000502987 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 ARHGEF3Q9NR81 526 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 HCFC1R1Q9NWW0 138 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 BACE2Q9Y5Z0 518 aa11.73□□□□□ -0.53
SNCA-207ENST00000502987 PRR23AA6NEV1 266 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 PROB1E7EW31 1015 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 CLDN3O15551 220 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 PAPLNO95428 1278 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 PLA2G4BP0C869 781 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 PLS3P13797 630 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 PTPN2P17706 415 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 MCM4P33991 863 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 SOX4Q06945 474 aaPredicted RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 SNW1Q13573 536 aaKnown RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 ALKAL1Q6UXT8 129 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 TAS1R3Q7RTX0 852 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 RASSF8Q8NHQ8 419 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 MCRS1Q96EZ8 462 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 SNX27Q96L92 541 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 ZMAT2Q96NC0 199 aaKnown RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 KXD1Q9BQD3 176 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 MMTAG2Q9BU76 263 aaKnown RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 CYP4F11Q9HBI6 524 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms