RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ADAM9Q13443 819 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 KLHL10Q6JEL2 608 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 CAVIN1Q6NZI2 390 aaKnown RBP15.36■□□□□ 0.05
RNF4-202ENST00000502316 RNF168Q8IYW5 571 aaPredicted RBP15.36■□□□□ 0.05
RNF4-202ENST00000502316 BEST2Q8NFU1 509 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 NELFBQ8WX92 580 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 DUSP9Q99956 384 aaKnown RBP15.36■□□□□ 0.05
RNF4-202ENST00000502316 MKNK1Q9BUB5 465 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 COLEC11Q9BWP8 271 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 VN1R3Q9BXE9 311 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 ALG13Q9NP73 1137 aaKnown RBP15.36■□□□□ 0.05
RNF4-202ENST00000502316 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 CTNND2Q9UQB3 1225 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 FRMD4BQ9Y2L6 1034 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 PODXLO00592 558 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 CETN3O15182 167 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 KIF4AO95239 1232 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 DNAJB1P25685 340 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 PSMC2P35998 433 aaKnown RBP15.35■□□□□ 0.05
RNF4-202ENST00000502316 ENPEPQ07075 957 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 CAMK1Q14012 370 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 ADGRE1Q14246 886 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 SKOR2Q2VWA4 1001 aaPredicted RBP15.35■□□□□ 0.05
RNF4-202ENST00000502316 CT47A1Q5JQC4 288 aaPredicted RBP15.35■□□□□ 0.05
RNF4-202ENST00000502316 CEP135Q66GS9 1140 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 DCLRE1AQ6PJP8 1040 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 CD300LGQ6UXG3 332 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 DDX53Q86TM3 631 aaKnown RBP15.35■□□□□ 0.05
RNF4-202ENST00000502316 WDR49Q8IV35 697 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 C3orf58Q8NDZ4 430 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 PLEKHO2Q8TD55 490 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 PARD3BQ8TEW8 1205 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 BORCS6Q96GS4 357 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 CDX2Q99626 313 aaPredicted RBP15.35■□□□□ 0.05
RNF4-202ENST00000502316 RWDD2AQ9UIY3 292 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 PRUNE2Q8WUY3 3088 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 PTPRJQ12913 1337 aa15.35■□□□□ 0.05
RNF4-202ENST00000502316 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 SLC16A3O15427 465 aaKnown RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 B3GAT3O94766 335 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 ERCC5P28715 1186 aaPredicted RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 INTS8Q75QN2 995 aaKnown RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 FAM186BQ8IYM0 893 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 CXorf38Q8TB03 319 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 TMC2Q8TDI7 906 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 CACTINQ8WUQ7 758 aaKnown RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 RABGGTAQ92696 567 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 MRPL38Q96DV4 380 aaKnown RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 CEP63Q96MT8 703 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 MED15Q96RN5 788 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 GAS2L1Q99501 681 aaPredicted RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 CGRRF1Q99675 332 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 TLR9Q9NR96 1032 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 INTS13Q9NVM9 706 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 DPP3Q9NY33 737 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 PUF60Q9UHX1 559 aaKnown RBP15.34■□□□□ 0.05
RNF4-202ENST00000502316 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
RNF4-202ENST00000502316 XIRP2A4UGR9 3374 aa15.33■□□□□ 0.05
RNF4-202ENST00000502316 LRRIQ3A6PVS8 624 aaPredicted RBP15.33■□□□□ 0.04
RNF4-202ENST00000502316 PIRO00625 290 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 FSCN2O14926 492 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 TADA2AO75478 443 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
RNF4-202ENST00000502316 IGFBP6P24592 240 aaPredicted RBP15.33■□□□□ 0.04
RNF4-202ENST00000502316 AARSP49588 968 aaKnown RBP eCLIP15.33■□□□□ 0.04
RNF4-202ENST00000502316 GUCY2FP51841 1108 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 TFAMQ00059 246 aaKnown RBP15.33■□□□□ 0.04
RNF4-202ENST00000502316 NFKBIBQ15653 356 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 PTPROQ16827 1216 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 DUOXA2Q1HG44 320 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 C9orf57Q5W0N0 161 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 FUT10Q6P4F1 479 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 TMEM130Q8N3G9 435 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 C1orf127Q8N9H9 656 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 OR5B17Q8NGF7 314 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 MYLIPQ8WY64 445 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 CCDC127Q96BQ5 260 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 EEF2KMTQ96G04 330 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 FNBP1Q96RU3 617 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 MTMR12Q9C0I1 747 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 ZBP1Q9H171 429 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 ITGA11Q9UKX5 1188 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 MTCH2Q9Y6C9 303 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 SF3B1O75533 1304 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■■■■■ 109.1
RNF4-202ENST00000502316 ATG2AQ2TAZ0 1938 aa15.33■□□□□ 0.04
RNF4-202ENST00000502316 IKBKBO14920 756 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 SOD2P04179 222 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 TMEM191BP0C7N4 346 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 EPB41P11171 864 aaKnown RBP15.32■□□□□ 0.04
RNF4-202ENST00000502316 PAX3P23760 479 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 AP3M2P53677 418 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 STX17P56962 302 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 ERVFC1P60507 584 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 ELAVL2Q12926 359 aaKnown RBP15.32■□□□□ 0.04
RNF4-202ENST00000502316 BFSP1Q12934 665 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 C1orf220Q5T0J3 134 aa15.32■□□□□ 0.04
RNF4-202ENST00000502316 LMBRD2Q68DH5 695 aaPredicted RBP15.32■□□□□ 0.04
RNF4-202ENST00000502316 PDE12Q6L8Q7 609 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms