RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CHN1P15882 459 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ACO1P21399 889 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 MMP13P45452 471 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 POLGP54098 1239 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 FSTL1Q12841 308 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 SLMAPQ14BN4 828 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF568Q3ZCX4 644 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 DALRD3Q5D0E6 543 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 XKR3Q5GH77 459 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ERMARDQ5T6L9 678 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 RNF187Q5TA31 235 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 FBXW10Q5XX13 1052 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 DCAF15Q66K64 600 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 MIS18BP1Q6P0N0 1132 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 MON1BQ7L1V2 547 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC25Q86WR0 208 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 PASD1Q8IV76 773 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 CDHR1Q96JP9 859 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 XPO6Q96QU8 1125 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 SELENOSQ9BQE4 189 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 TEX13BQ9BXU2 312 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 FAM129AQ9BZQ8 928 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ACAD9Q9H845 621 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 PICK1Q9NRD5 415 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 STYXL1Q9Y6J8 313 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 CAPN7Q9Y6W3 813 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 UMODL1Q5DID0 1318 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 H0YCG3 227 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 FSBPO95073 299 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 GLRA2P23416 452 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 NSFP46459 744 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ADCY2Q08462 1091 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 STRN3Q13033 797 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 CALCOCO2Q13137 446 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 WDR44Q5JSH3 913 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 SCARA3Q6AZY7 606 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 DEFB132Q7Z7B7 95 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF677Q86XU0 584 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 ATXN2LQ8WWM7 1075 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 SEC16BQ96JE7 1060 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 DDX23Q9BUQ8 820 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 R3HDM2Q9Y2K5 976 aaKnown RBP10.52□□□□□ -0.73
CLIP1-204ENST00000501271 GJA3Q9Y6H8 435 aa10.52□□□□□ -0.73
CLIP1-204ENST00000501271 LRRIQ4A6NIV6 560 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 MYBL1P10243 752 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 DRD4P21917 467 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 CHKAP35790 457 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 SPRED3Q2MJR0 410 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 GNPTABQ3T906 1256 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 TNFAIP8L3Q5GJ75 292 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 RHBDF2Q6PJF5 856 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 CENPTQ96BT3 561 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 FAM81BQ96LP2 452 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 TMEM109Q9BVC6 243 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 PORCNQ9H237 461 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 RBAKQ9NYW8 714 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-204ENST00000501271 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 ASIC3Q9UHC3 531 aa10.51□□□□□ -0.73
CLIP1-204ENST00000501271 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 ATP2A1O14983 1001 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 AGTP01019 485 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 OATP04181 439 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 IVDP26440 423 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 SLC1A1P43005 524 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 NOMO3P69849 1222 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 CUL2Q13617 745 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 AUHQ13825 339 aaKnown RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 TRIP13Q15645 432 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 TMEM270Q6UE05 265 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 TRIM11Q96F44 468 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 TARS2Q9BW92 718 aaKnown RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 DCLK3Q9C098 648 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 DHX33Q9H6R0 707 aaKnown RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF302Q9NR11 478 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 WHRNQ9P202 907 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 RASGRF2O14827 1237 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 PEX10O60683 326 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 STAM2O75886 525 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 PROSCO94903 275 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 GJB6O95452 261 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 ACSL3O95573 720 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 PIGRP01833 764 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 RALAP11233 206 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 GNA15P30679 374 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 CDR1P51861 262 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 TAS2R40P59535 323 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 BPIFB4P59827 614 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 KLF1Q13351 362 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 PTK6Q13882 451 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms