RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 DNAJB4Q9UDY4 337 aa13.79□□□□□ -0.2
TMEM39B-209ENST00000498613 RWDD2AQ9UIY3 292 aa13.79□□□□□ -0.2
TMEM39B-209ENST00000498613 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
TMEM39B-209ENST00000498613 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 NT5C1B-RDH14C9J2C7 533 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 IKBKBO14920 756 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 CA8P35219 290 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 PNPLA4P41247 253 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 RBP5P82980 135 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 ENPEPQ07075 957 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 SPAG1Q07617 926 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 MYO1EQ12965 1108 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 TRPC3Q13507 836 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 GRIN2CQ14957 1233 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 PSMD6Q15008 389 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 ZBTB6Q15916 424 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 STX1AQ16623 288 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 PDXDC1Q6P996 788 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 FAM114A1Q8IWE2 563 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 FAM186BQ8IYM0 893 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 MAFAQ8NHW3 353 aaPredicted RBP13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 ZMAT2Q96NC0 199 aaKnown RBP13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 TTYH1Q9H313 450 aaPredicted RBP13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 ALG13Q9NP73 1137 aaKnown RBP13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 PRDM6Q9NQX0 595 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 ADAM28Q9UKQ2 775 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 CTNND2Q9UQB3 1225 aa13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
TMEM39B-209ENST00000498613 PODXLO00592 558 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 SF3B1O75533 1304 aaKnown RBP eCLIP13.77□□□□□ -0.213e-6■■■■■ 137.9
TMEM39B-209ENST00000498613 CLSTN1O94985 981 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 ITGB1P05556 798 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 KRT19P08727 400 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 LRPAP1P30533 357 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 CLCNKBP51801 687 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 VAMP7P51809 220 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 CETN1Q12798 172 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 MYO9BQ13459 2157 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 COL4A6Q14031 1691 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 UPP1Q16831 310 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 USP41Q3LFD5 358 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 RBM43Q6ZSC3 357 aaKnown RBP13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 SPPL3Q8TCT6 385 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 POF1BQ8WVV4 589 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 ENTPD7Q9NQZ7 604 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 TLR9Q9NR96 1032 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 MRPL17Q9NRX2 175 aaKnown RBP13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 INTS13Q9NVM9 706 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 MAGEC2Q9UBF1 373 aaPredicted RBP13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 ARMCX3Q9UH62 379 aaPredicted RBP13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
TMEM39B-209ENST00000498613 CITO14578 2027 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 FSD2A1L4K1 749 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 NCK2O43639 380 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 CXCL14O95715 111 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 NFICP08651 508 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 BMP6P22004 513 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 STX17P56962 302 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 CREMQ03060 361 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 BIRC3Q13489 604 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 SMC1AQ14683 1233 aaKnown RBP13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 ZCWPW2Q504Y3 356 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 DSTYKQ6XUX3 929 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 VPS52Q8N1B4 723 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 APPL2Q8NEU8 664 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 C18orf25Q96B23 403 aaPredicted RBP13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 MRPL38Q96DV4 380 aaKnown RBP13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 ZNF560Q96MR9 790 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 CGRRF1Q99675 332 aa13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
TMEM39B-209ENST00000498613 GRM6O15303 877 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 AKAP3O75969 853 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 CAVIN2O95810 425 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 SOD2P04179 222 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 URODP06132 367 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TPM2P07951 284 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 FOSL2P15408 326 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 POU3F3P20264 500 aaPredicted RBP13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 GTF2H1P32780 548 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 PBX3P40426 434 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 CASP4P49662 377 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TAF6P49848 677 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 NAB2Q15742 525 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms