RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PIGOQ8TEQ8 1089 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 DEPDC1BQ8WUY9 529 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 C2orf40Q9H1Z8 148 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
CDK9-205ENST00000498339 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
CDK9-205ENST00000498339 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 WDR27A2RRH5 827 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 TMEM189-UBE2V1I3L0A0 370 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 HRO43593 1189 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 MYL4P12829 197 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 HSPA4P34932 840 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 CNR2P34972 360 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 VIPR2P41587 438 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 BRCC3P46736 316 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 KPNA1P52294 538 aaPredicted RBP12.85□□□□□ -0.35
CDK9-205ENST00000498339 NAB2Q15742 525 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 CCDC6Q16204 474 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 DCAF4L1Q3SXM0 396 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 N4BP2L1Q5TBK1 243 aaPredicted RBP12.85□□□□□ -0.35
CDK9-205ENST00000498339 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 SPEM1Q8N4L4 309 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
CDK9-205ENST00000498339 SMARCD2Q92925 531 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 UROC1Q96N76 676 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
CDK9-205ENST00000498339 GOLGA2P5Q9HBQ8 144 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 RBM12Q9NTZ6 932 aaKnown RBP12.85□□□□□ -0.35
CDK9-205ENST00000498339 INSL5Q9Y5Q6 135 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 FRYQ5TBA9 3013 aa12.85□□□□□ -0.35
CDK9-205ENST00000498339 ASPMQ8IZT6 3477 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 A0A087WWV3 80 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 AXIN1O15169 862 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 CHRNB1P11230 501 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 GJA1P17302 382 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 ATP2B1P20020 1258 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 PMLP29590 882 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 CCR2P41597 374 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 PTGDRQ13258 359 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 GAS6Q14393 721 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 SF3A2Q15428 464 aaKnown RBP12.84□□□□□ -0.35
CDK9-205ENST00000498339 CALCRLQ16602 461 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 CDCA2Q69YH5 1023 aaPredicted RBP12.84□□□□□ -0.35
CDK9-205ENST00000498339 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 Q6ZS52 159 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 MAP4K3Q8IVH8 894 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 MCPH1Q8NEM0 835 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 ZNF461Q8TAF7 563 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 DEPTORQ8TB45 409 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 ZSCAN18Q8TBC5 510 aaPredicted RBP12.84□□□□□ -0.35
CDK9-205ENST00000498339 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
CDK9-205ENST00000498339 ASAH2Q9NR71 780 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 USP20Q9Y2K6 914 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 LAMA1P25391 3075 aa12.84□□□□□ -0.35
CDK9-205ENST00000498339 CNOT1A5YKK6 2376 aaKnown RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 SDK1Q7Z5N4 2213 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 H7C4K7 107 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 CDKL5O76039 1030 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 LYPLA2O95372 231 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 ATF2P15336 505 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 IGFBP6P24592 240 aaPredicted RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 SOX9P48436 509 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 TWF1Q12792 350 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 COL9A2Q14055 689 aaPredicted RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 UPP1Q16831 310 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 FAM187BQ17R55 369 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 C1orf228Q6PIY5 440 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 C3orf58Q8NDZ4 430 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 KCNB2Q92953 911 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 MSANTD3Q96H12 275 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 ARRDC1-AS1Q9H2J1 176 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 FZD8Q9H461 694 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
CDK9-205ENST00000498339 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 CHD6Q8TD26 2715 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 EML5Q05BV3 1969 aa12.83□□□□□ -0.36
CDK9-205ENST00000498339 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
CDK9-205ENST00000498339 MICAL2O94851 1124 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 SEC24AO95486 1093 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 CPB1P15086 417 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 TXKP42681 527 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 YARSP54577 528 aaKnown RBP12.82□□□□□ -0.36
CDK9-205ENST00000498339 EVCP57679 992 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 TEAD2Q15562 447 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms