RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 IGSF9BQ9UPX0 1349 aa13.32□□□□□ -0.28
AFF3-215ENST00000498090 GMNCA6NCL1 334 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 CCDC169A6NNP5 214 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 MYO1FO00160 1098 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 FKTNO75072 461 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 TXNP10599 105 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 SCP2P22307 547 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 IFFO1Q0D2I5 559 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 BYSLQ13895 437 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 NEDD9Q14511 834 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 TTLL4Q14679 1199 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 CYP1B1Q16678 543 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 ODF2Q5BJF6 829 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 KRT39Q6A163 491 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 METTL7BQ6UX53 244 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 ABHD15Q6UXT9 468 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 DDX42Q86XP3 938 aaKnown RBP eCLIP13.31□□□□□ -0.28
AFF3-215ENST00000498090 JAMLQ86YT9 394 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 OTUD6BQ8N6M0 293 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 RDH13Q8NBN7 331 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 MYCBPAPQ8TBZ2 947 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 ATP8B4Q8TF62 1192 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 CCT8L2Q96SF2 557 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 IKZF4Q9H2S9 585 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 PABPC3Q9H361 631 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 ZDHHC18Q9NUE0 388 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 SRRDQ9UH36 339 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 COG5Q9UP83 839 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 SAMM50Q9Y512 469 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 GSTTP1A0A1W2PQM5 241 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 H0YCG3 227 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 ZC3H11AO75152 810 aaKnown RBP eCLIP13.31□□□□□ -0.28
AFF3-215ENST00000498090 LRRN2O75325 713 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 CYP1A2P05177 515 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 USP8P40818 1118 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 FNTAP49354 379 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 GPC3P51654 580 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 TRIM32Q13049 653 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 SLMAPQ14BN4 828 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 PLCB4Q15147 1175 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 DNAAF5Q86Y56 855 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 CCDC60Q8IWA6 550 aaPredicted RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 TRPV1Q8NER1 839 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 EPS8L1Q8TE68 723 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 MAIP1Q8WWC4 291 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 SHC3Q92529 594 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 P3H4Q92791 437 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 PGM2Q96G03 612 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 TMEM109Q9BVC6 243 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 TAS2R14Q9NYV8 317 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
AFF3-215ENST00000498090 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
AFF3-215ENST00000498090 KIAA0391O15091 583 aaKnown RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 ATG7O95352 703 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 SUPT20HL2P0C7V6 817 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 SMPD1P17405 629 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 GCLMP48507 274 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 PMS2P54278 862 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 DLG4P78352 724 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 DMP1Q13316 513 aaPredicted RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 KRT71Q3SY84 523 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 C1orf220Q5T0J3 134 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 TTC19Q6DKK2 380 aaPredicted RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 TAX1BP1Q86VP1 789 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 MAP4K3Q8IVH8 894 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 ARHGEF19Q8IW93 802 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 C12orf50Q8NA57 414 aaPredicted RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 ALG3Q92685 438 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 TLCD1Q96CP7 247 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 TRIM11Q96F44 468 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 PCYT2Q99447 389 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 CBWD1Q9BRT8 395 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 CELF4Q9BZC1 486 aaKnown RBP13.3□□□□□ -0.28
AFF3-215ENST00000498090 TMEM117Q9H0C3 514 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 PCIF1Q9H4Z3 704 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
AFF3-215ENST00000498090 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 E7EVH7 732 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 ZNF862O60290 1169 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 FSBPO95073 299 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
AFF3-215ENST00000498090 MAN1A1P33908 653 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 PEX5P50542 639 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 PDE6CP51160 858 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 RTP1P59025 263 aa13.29□□□□□ -0.28
AFF3-215ENST00000498090 CDR2Q01850 454 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms