RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KANSL3Q9P2N6 904 aa14.67□□□□□ -0.06
CPNE1-227ENST00000498056 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 B4GALT3O60512 393 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 PHACTR2O75167 634 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 AFPP02771 609 aaKnown RBP14.66□□□□□ -0.06
CPNE1-227ENST00000498056 ITGB3P05106 788 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 BMP8BP34820 402 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 HTRA4P83105 476 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-227ENST00000498056 PLCB2Q00722 1185 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 ENPEPQ07075 957 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 PPP3CAQ08209 521 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 DUOXA2Q1HG44 320 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 C1orf220Q5T0J3 134 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 TDRD10Q5VZ19 366 aaKnown RBP14.66□□□□□ -0.06
CPNE1-227ENST00000498056 ZNF689Q96CS4 500 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-227ENST00000498056 VPS16Q9H269 839 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 TMEM8AQ9HCN3 771 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 DPP3Q9NY33 737 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 DNAJB4Q9UDY4 337 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 INSL6Q9Y581 213 aa14.66□□□□□ -0.06
CPNE1-227ENST00000498056 MRPL42Q9Y6G3 142 aaKnown RBP14.66□□□□□ -0.06
CPNE1-227ENST00000498056 MYH10P35580 1976 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 LCHNA4D1U4 455 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 N4BP1O75113 896 aaKnown RBP14.65□□□□□ -0.06
CPNE1-227ENST00000498056 DDHD2O94830 711 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 SERPINC1P01008 464 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 POLR2BP30876 1174 aaKnown RBP14.65□□□□□ -0.06
CPNE1-227ENST00000498056 PBX3P40426 434 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 OR1G1P47890 313 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 FMO5P49326 533 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.06
CPNE1-227ENST00000498056 AP3M2P53677 418 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 KCNH2Q12809 1159 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 NAB2Q15742 525 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 CBWD6Q4V339 395 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 CBWD3Q5JTY5 395 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 CBWD5Q5RIA9 395 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 ZNF280BQ86YH2 543 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 FIBCD1Q8N539 461 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 HASPINQ8TF76 798 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 RABGGTAQ92696 567 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 TSPAN18Q96SJ8 248 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 RAD9AQ99638 391 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 NRDE2Q9H7Z3 1164 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
CPNE1-227ENST00000498056 ITGA11Q9UKX5 1188 aa14.65□□□□□ -0.06
CPNE1-227ENST00000498056 PRG3Q9Y2Y8 225 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-227ENST00000498056 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
CPNE1-227ENST00000498056 PODXLO00592 558 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 MYOGP15173 224 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 LAG3P18627 525 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 GTF2H1P32780 548 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 CLCNKBP51801 687 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 CLDN10P78369 228 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 DSC1Q08554 894 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 TRPC3Q13507 836 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 ZACNQ401N2 412 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 MIIPQ5JXC2 388 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 KRT39Q6A163 491 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 TRAPPC11Q7Z392 1133 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 ZNF516Q92618 1163 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 ZNF560Q96MR9 790 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 UROC1Q96N76 676 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 PAAF1Q9BRP4 392 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 NDST4Q9H3R1 872 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 GCNT4Q9P109 453 aa14.64□□□□□ -0.07
CPNE1-227ENST00000498056 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.64□□□□□ -0.07
CPNE1-227ENST00000498056 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 PPEF2O14830 753 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 KIF4AO95239 1232 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 HLA-DRAP01903 254 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 CA3P07451 260 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 CYP3A5P20815 502 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 SLC11A1P49279 550 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 FANCCQ00597 558 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 NCOA4Q13772 614 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 ZBTB6Q15916 424 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 ZNF699Q32M78 642 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 FILIP1LQ4L180 1135 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 FKBP15Q5T1M5 1219 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 C9orf57Q5W0N0 161 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 SV2AQ7L0J3 742 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 COLGALT2Q8IYK4 626 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
CPNE1-227ENST00000498056 TAS1R2Q8TE23 839 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 ZNF558Q96NG5 402 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 IMPG2Q9BZV3 1241 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 CWH43Q9H720 699 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.63□□□□□ -0.07
CPNE1-227ENST00000498056 SIX4Q9UIU6 781 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 AGAP1Q9UPQ3 857 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 PCDHA11Q9Y5I1 949 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 TRIOBPQ9H2D6 2365 aa14.63□□□□□ -0.07
CPNE1-227ENST00000498056 F8W810 466 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 C4BPAP04003 597 aaKnown RBP14.62□□□□□ -0.07
CPNE1-227ENST00000498056 LRPAP1P30533 357 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 CTNNB1P35222 781 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 PBX2P40425 430 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms