RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP13-205ENST00000497380 C15orf39Q6ZRI6 1047 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 VWCEQ96DN2 955 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
USP13-205ENST00000497380 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
USP13-205ENST00000497380 SLC9A7Q96T83 725 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■□□□□ 8.5
USP13-205ENST00000497380 NUP58Q9BVL2 599 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
USP13-205ENST00000497380 MTMR12Q9C0I1 747 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 RAB20Q9NX57 234 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 COQ4Q9Y3A0 265 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP13-205ENST00000497380 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
USP13-205ENST00000497380 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 PTGESO14684 152 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 UPP2O95045 317 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 ADCY5O95622 1261 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 NFICP08651 508 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 KRT19P08727 400 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 TPM1P09493 284 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 FGFR1P11362 822 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 P4HA1P13674 534 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 CDC25BP30305 580 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 PNPLA4P41247 253 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 SCNN1GP51170 649 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 TUSC3Q13454 348 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 NCOA4Q13772 614 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 CBWD6Q4V339 395 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 CBWD3Q5JTY5 395 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 GLRA4Q5JXX5 417 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 CBWD5Q5RIA9 395 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
USP13-205ENST00000497380 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
USP13-205ENST00000497380 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.29□□□□□ -0.6
USP13-205ENST00000497380 DRC7Q8IY82 874 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 CRIPAKQ8N1N5 446 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 LRRC52Q8N7C0 313 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 NEK11Q8NG66 645 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 FAXDC2Q96IV6 333 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
USP13-205ENST00000497380 ZBED2Q9BTP6 218 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 TTC3P53804 2025 aa11.29□□□□□ -0.6
USP13-205ENST00000497380 MICAL3Q7RTP6 2002 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 RALGAPA2Q2PPJ7 1873 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 ARHGEF37A1IGU5 675 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 MEFVO15553 781 aaPredicted RBP11.28□□□□□ -0.6
USP13-205ENST00000497380 DGKIO75912 1065 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 CLSTN1O94985 981 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 STAU1O95793 577 aaKnown RBP11.28□□□□□ -0.6
USP13-205ENST00000497380 POMCP01189 267 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 HLA-DRAP01903 254 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 ITGB3P05106 788 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 RFX1P22670 979 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 LRPAP1P30533 357 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 WNT7BP56706 349 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 TRIM14Q14142 442 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 SYCP1Q15431 976 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 EPC2Q52LR7 807 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 CLLU1OSQ5K130 101 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 SPECC1LQ69YQ0 1117 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 FMNL3Q8IVF7 1028 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
USP13-205ENST00000497380 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 GSTCDQ8NEC7 633 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 ZNF397Q8NF99 534 aaPredicted RBP11.28□□□□□ -0.6
USP13-205ENST00000497380 TAS1R2Q8TE23 839 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 CASD1Q96PB1 797 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 YME1L1Q96TA2 773 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 PLCB1Q9NQ66 1216 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 MIOSQ9NXC5 875 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 ITIH6Q6UXX5 1313 aa11.28□□□□□ -0.6
USP13-205ENST00000497380 ANO9A1A5B4 782 aa11.27□□□□□ -0.61
USP13-205ENST00000497380 TEX33O43247 280 aa11.27□□□□□ -0.61
USP13-205ENST00000497380 GJB5O95377 273 aa11.27□□□□□ -0.61
USP13-205ENST00000497380 CST3P01034 146 aaPredicted RBP11.27□□□□□ -0.61
USP13-205ENST00000497380 ALDH2P05091 517 aa11.27□□□□□ -0.61
USP13-205ENST00000497380 ATP2A2P16615 1042 aaKnown RBP11.27□□□□□ -0.61
USP13-205ENST00000497380 TRIM21P19474 475 aaKnown RBP11.27□□□□□ -0.61
USP13-205ENST00000497380 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms