RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SMG7Q92540 1137 aaKnown RBP8.58□□□□□ -1.04
SRRM1-220ENST00000496882 RABGGTAQ92696 567 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 PRRX2Q99811 253 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 MMTAG2Q9BU76 263 aaKnown RBP8.58□□□□□ -1.04
SRRM1-220ENST00000496882 TARS2Q9BW92 718 aaKnown RBP8.58□□□□□ -1.04
SRRM1-220ENST00000496882 GPR62Q9BZJ7 368 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 CDT1Q9H211 546 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 MFSD1Q9H3U5 465 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 CHST7Q9NS84 486 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 ZDHHC7Q9NXF8 308 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 ARHGAP28Q9P2N2 729 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 ANKFY1Q9P2R3 1169 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 TFIP11Q9UBB9 837 aaKnown RBP8.58□□□□□ -1.04
SRRM1-220ENST00000496882 CDH22Q9UJ99 828 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 ODF2LQ9ULJ1 636 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
SRRM1-220ENST00000496882 F8W810 466 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 CLDN3O15551 220 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 TGM5O43548 720 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 TOM1L1O75674 476 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 B3GAT3O94766 335 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 MYBP10242 640 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 SLC12A3P55017 1021 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 NOLC1Q14978 699 aaKnown RBP eCLIP8.57□□□□□ -1.04
SRRM1-220ENST00000496882 SF3A1Q15459 793 aaKnown RBP8.57□□□□□ -1.04
SRRM1-220ENST00000496882 TMEM119Q4V9L6 283 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 PPM1LQ5SGD2 360 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 PRSS55Q6UWB4 352 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-220ENST00000496882 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-220ENST00000496882 KCNK18Q7Z418 384 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 GPBP1Q86WP2 473 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 DAW1Q8N136 415 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 FBXL6Q8N531 539 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 MYCT1Q8N699 235 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 PIK3R5Q8WYR1 880 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 B3GALT6Q96L58 329 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 PNMA5Q96PV4 448 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 PAAF1Q9BRP4 392 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 ZHX3Q9H4I2 956 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 CACNG4Q9UBN1 327 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 CCDC39Q9UFE4 941 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 NUB1Q9Y5A7 615 aa8.57□□□□□ -1.04
SRRM1-220ENST00000496882 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-220ENST00000496882 CLUHO75153 1309 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 TMEM189-UBE2V1I3L0A0 370 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 K7ENM7 598 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 XPOTO43592 962 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 XYLBO75191 536 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 RFPL2O75678 378 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 EFEMP2O95967 443 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 EDN1P05305 212 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 HSP90AA1P07900 732 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 LIG4P49917 911 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 CLCNKBP51801 687 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 MAPK7Q13164 816 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 CUL4AQ13619 759 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 KYAT1Q16773 422 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 RTP2Q5QGT7 225 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 DESI1Q6ICB0 168 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 ZPBP2Q6X784 338 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 ANKS3Q6ZW76 656 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 CEP120Q8N960 986 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 LARP4BQ92615 738 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 SNX27Q96L92 541 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 PPP1R10Q96QC0 940 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 NTPCRQ9BSD7 190 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 RHOBTB2Q9BYZ6 727 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 PARVGQ9HBI0 331 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 WDR6Q9NNW5 1121 aaKnown RBP8.56□□□□□ -1.04
SRRM1-220ENST00000496882 IGSF9Q9P2J2 1179 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 POLIQ9UNA4 740 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 VPS9D1Q9Y2B5 631 aa8.56□□□□□ -1.04
SRRM1-220ENST00000496882 NPHP3-ACAD11A0A0J9YXS1 232 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 H7C4K7 107 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 PODXLO00592 558 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 HNRNPDLO14979 420 aaKnown RBP8.55□□□□□ -1.04
SRRM1-220ENST00000496882 ASGR2P07307 311 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 C8AP07357 584 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 CLTAP09496 248 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 HNRNPA1P09651 372 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRRM1-220ENST00000496882 MAPTP10636 758 aaKnown RBP8.55□□□□□ -1.04
SRRM1-220ENST00000496882 KCNE1P15382 129 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 PLCG1P19174 1290 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 MARCKSP29966 332 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-220ENST00000496882 ELF1P32519 619 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
SRRM1-220ENST00000496882 PTPN5P54829 565 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 NCKAP1LP55160 1127 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 PPP2R3AQ06190 1150 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 TDGQ13569 410 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 KARSQ15046 597 aaKnown RBP8.55□□□□□ -1.04
SRRM1-220ENST00000496882 NAB2Q15742 525 aa8.55□□□□□ -1.04
SRRM1-220ENST00000496882 UPP1Q16831 310 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms