RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 EXTL3O43909 919 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 LILRB3O75022 631 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 TBX10O75333 385 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 CNPP09543 421 aaKnown RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 HNRNPA1P09651 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 PFKFB1P16118 471 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 FGFR3P22607 806 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 NMT1P30419 496 aaKnown RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 LTBRP36941 435 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 CLCN4P51793 760 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 CLCNKBP51801 687 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 AFF1P51825 1210 aaKnown RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 TFF2Q03403 129 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 PKP1Q13835 747 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 MYBPC2Q14324 1141 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 TMEM132DQ14C87 1099 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 NAB2Q15742 525 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 SLC10A6Q3KNW5 377 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 LIN9Q5TKA1 542 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 FAM171A1Q5VUB5 890 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 ARMCX5Q6P1M9 558 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 CCDC149Q6ZUS6 474 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 ADGRD2Q7Z7M1 963 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 TMEM173Q86WV6 379 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 ZNF507Q8TCN5 953 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 TMEM174Q8WUU8 243 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 RIN2Q8WYP3 895 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 KIF12Q96FN5 646 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 ZNF560Q96MR9 790 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 KLHL5Q96PQ7 755 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 PHF7Q9BWX1 381 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 C1QTNF1Q9BXJ1 281 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 COL25A1Q9BXS0 654 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 PRDM6Q9NQX0 595 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 EXOC1Q9NV70 894 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 RMND1Q9NWS8 449 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 CLEC1BQ9P126 229 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 HCSTQ9UBK5 93 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 USTQ9Y2C2 406 aa8.25□□□□□ -1.09
CDHR3-214ENST00000496633 ZFP37Q9Y6Q3 630 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-214ENST00000496633 MYO7AQ13402 2215 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ZNF233A6NK53 670 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 TEX28O15482 410 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 CSPG5O95196 566 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 KIF4AO95239 1232 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 EDN1P05305 212 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 POU2F2P09086 479 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 CXCL8P10145 99 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 HOXA9P31269 272 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ELF1P32519 619 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-214ENST00000496633 MCM4P33991 863 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 PPP1R2P41236 205 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 KCNQ1P51787 676 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 AP3M2P53677 418 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 SMARCB1Q12824 385 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 RAB33AQ14088 237 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 CBX2Q14781 532 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ZBTB6Q15916 424 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ENOX2Q16206 610 aaKnown RBP8.24□□□□□ -1.09
CDHR3-214ENST00000496633 PSMD5Q16401 504 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 BMT2Q1RMZ1 405 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ZC2HC1CQ53FD0 456 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-214ENST00000496633 GLRA4Q5JXX5 417 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 SPATA1Q5VX52 437 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 TPGS2Q68CL5 300 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ZNF280DQ6N043 979 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 METTL23Q86XA0 190 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 CEP57Q86XR8 500 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 C12orf56Q8IXR9 622 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 GJD3Q8N144 294 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 GPD1LQ8N335 351 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 CEP120Q8N960 986 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 VN1R2Q8NFZ6 395 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 SPATA18Q8TC71 538 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 SLC22A17Q8WUG5 538 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ACSF2Q96CM8 615 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-214ENST00000496633 ZBTB45Q96K62 511 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-214ENST00000496633 SUSD3Q96L08 255 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 TIGD1Q96MW7 591 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 GPR62Q9BZJ7 368 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 HPSEQ9Y251 543 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 TTC28Q96AY4 2481 aa8.24□□□□□ -1.09
CDHR3-214ENST00000496633 BDP1A6H8Y1 2624 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 A0A087X0B3 334 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 A0A1B0GVL5 298 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 OR6C75A6NL08 312 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 LACTBL1A8MY62 500 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 C2CD2LO14523 706 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 FAM189A1O60320 539 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 XYLBO75191 536 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 SMC2O95347 1197 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 PAPLNO95428 1278 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 GLP2RO95838 553 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 ODC1P11926 461 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 TYMPP19971 482 aa8.23□□□□□ -1.09
CDHR3-214ENST00000496633 RPL13P26373 211 aaKnown RBP8.23□□□□□ -1.09
CDHR3-214ENST00000496633 YWHAHQ04917 246 aaPredicted RBP8.23□□□□□ -1.09
CDHR3-214ENST00000496633 MYO1EQ12965 1108 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms