RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TMEM109Q9BVC6 243 aa8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 CADM1Q9BY67 442 aaKnown RBP8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 NEUROG2Q9H2A3 272 aa8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 GTF3C4Q9UKN8 822 aa8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 TRPC5Q9UL62 973 aaPredicted RBP8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 CHKBQ9Y259 395 aa8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 PCDH11XQ9BZA7 1347 aa8.63□□□□□ -1.03
CRNKL1-205ENST00000496549 TRPM2O94759 1503 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 FUOMA2VDF0 154 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 E9PMD0 336 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 FOXP2O15409 715 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ZBTB11O95625 1053 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ITGA4P13612 1032 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF200P98182 395 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 RALGDSQ12967 914 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 RHOT2Q8IXI1 618 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 MB21D2Q8IYB1 491 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CDHR1Q96JP9 859 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 EHD1Q9H4M9 534 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PLK2Q9NYY3 685 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 HERC5Q9UII4 1024 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CEP170BQ9Y4F5 1589 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 SPDYE16A6NNV3 312 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 TIMM44O43615 452 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 GUCY1B2O75343 617 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PLS3P13797 630 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 VARSP26640 1264 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 IL15P40933 162 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 MAPK6Q16659 721 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ANKDD1AQ495B1 522 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 SGO2Q562F6 1265 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CEP78Q5JTW2 689 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ATG16L1Q676U5 607 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CLNKQ7Z7G1 428 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 MCF2L2Q86YR7 1114 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF507Q8TCN5 953 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PHF12Q96QT6 1004 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PARVGQ9HBI0 331 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 DISC1Q9NRI5 854 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PNPLA7Q6ZV29 1317 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CALM1P0DP23 149 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CALM2P0DP24 149 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CALM3P0DP25 149 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 NAT2P11245 290 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 MYH8P13535 1937 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CSE1LP55060 971 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 RPL26P61254 145 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PLOD1Q02809 727 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 FCHO2Q0JRZ9 810 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 ARL13BQ3SXY8 428 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 SMUG1Q53HV7 270 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 PPP1R2P3Q6NXS1 205 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 SLC43A3Q8NBI5 491 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 AZIN2Q96A70 460 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 KCNK16Q96T55 309 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 EFHD1Q9BUP0 239 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 NUP85Q9BW27 656 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CDC42EP4Q9H3Q1 356 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 CYLDQ9NQC7 956 aa8.62□□□□□ -1.03
CRNKL1-205ENST00000496549 IQGAP3Q86VI3 1631 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 PXDNLA1KZ92 1463 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF609O15014 1411 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TTC34A8MYJ7 566 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 H3BNX3 289 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 DLG4P78352 724 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 FKBP3Q00688 224 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 CETN1Q12798 172 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF211Q13398 564 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 GIT2Q14161 759 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SPDYAQ5MJ70 313 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 IFIT1BQ5T764 474 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SLC7A5P1Q8MH63 180 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 RNF169Q8NCN4 708 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TSPAN14Q8NG11 270 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 COL4A3BPQ9Y5P4 624 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SQORQ9Y6N5 450 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 C1orf232A0A0U1RR37 186 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 AREL1O15033 823 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 KLHL41O60662 606 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SIN3BO75182 1162 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SERPINB7O75635 380 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TAC1P20366 129 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 CRABP2P29373 138 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 HNRNPH3P31942 346 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TPD52P55327 224 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 PPP6R3Q5H9R7 873 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 DCAF17Q5H9S7 520 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF618Q5T7W0 954 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ITPRIPL1Q6GPH6 555 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms