RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 C17orf75Q9HAS0 396 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 CDH7Q9ULB5 785 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 CDY1Q9Y6F8 540 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 ZFP37Q9Y6Q3 630 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-208ENST00000496375 CITO14578 2027 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 MYH11P35749 1972 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 SFI1A8K8P3 1242 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 SPTLC2O15270 562 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 SLC16A4O15374 487 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 MCF2P10911 925 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 HARSP12081 509 aaKnown RBP15.73■□□□□ 0.11
CXCL12-208ENST00000496375 PROZP22891 400 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 NUCB2P80303 420 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 RAD51AP2Q09MP3 1159 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 UVSSAQ2YD98 709 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 ANKS3Q6ZW76 656 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
CXCL12-208ENST00000496375 SNX27Q96L92 541 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 ZMAT2Q96NC0 199 aaKnown RBP15.73■□□□□ 0.11
CXCL12-208ENST00000496375 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 TIPINQ9BVW5 301 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 SLC38A7Q9NVC3 462 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 CFAP45Q9UL16 551 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 BACE2Q9Y5Z0 518 aa15.73■□□□□ 0.11
CXCL12-208ENST00000496375 PODXLO00592 558 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ABLIM1O14639 778 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 POU2F2P09086 479 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 GUCY2CP25092 1073 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 MARCKSP29966 332 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 CEBPZQ03701 1054 aaKnown RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 STK38Q15208 465 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ANGPT1Q15389 498 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 FOXD4L5Q5VV16 416 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 PARM1Q6UWI2 310 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 MPZL3Q6UWV2 235 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 FRMD5Q7Z6J6 570 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ITFG1Q8TB96 612 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 KCNG4Q8TDN1 519 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 FOXD4L4Q8WXT5 416 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 FGF13Q92913 245 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 FGF14Q92915 247 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ACAP3Q96P50 834 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 RPP25Q9BUL9 199 aaKnown RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 TBC1D17Q9HA65 648 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ARHGEF3Q9NR81 526 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 SLC2A4RGQ9NR83 387 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 HCFC1R1Q9NWW0 138 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 RCOR1Q9UKL0 485 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-208ENST00000496375 ATP6V1DQ9Y5K8 247 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 NOTCH4Q99466 2003 aa15.72■□□□□ 0.11
CXCL12-208ENST00000496375 PRR23AA6NEV1 266 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 KCNE1P15382 129 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 UBA7P41226 1012 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 DNM1Q05193 864 aaKnown RBP15.71■□□□□ 0.11
CXCL12-208ENST00000496375 STRN3Q13033 797 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 MTSS1LQ765P7 747 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 SPIRE2Q8WWL2 714 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 C18orf25Q96B23 403 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-208ENST00000496375 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-208ENST00000496375 PLIN2Q99541 437 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 NTPCRQ9BSD7 190 aaKnown RBP15.71■□□□□ 0.11
CXCL12-208ENST00000496375 CNTN3Q9P232 1028 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 ANKFY1Q9P2R3 1169 aa15.71■□□□□ 0.11
CXCL12-208ENST00000496375 DNMT3BQ9UBC3 853 aaKnown RBP15.71■□□□□ 0.11
CXCL12-208ENST00000496375 PTPRZ1P23471 2315 aaPredicted RBP15.71■□□□□ 0.1
CXCL12-208ENST00000496375 MEFVO15553 781 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 CUTAO60888 179 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 PLS3P13797 630 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 SMTNP53814 917 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 GPC5P78333 572 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 ROR1Q01973 937 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 NOLC1Q14978 699 aaKnown RBP eCLIP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 PABPC1LQ4VXU2 614 aaKnown RBP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 SEZ6Q53EL9 994 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 USP49Q70CQ1 688 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 RTL10Q7L3V2 364 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 SYT2Q8N9I0 419 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 TMEM161BQ8NDZ6 487 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 LRRC15Q8TF66 581 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 NKD2Q969F2 451 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 CALML4Q96GE6 196 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 KCND2Q9NZV8 630 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 KCNG1Q9UIX4 513 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 KCNH3Q9ULD8 1083 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 NUB1Q9Y5A7 615 aa15.7■□□□□ 0.1
CXCL12-208ENST00000496375 RIF1Q5UIP0 2472 aaKnown RBP15.7■□□□□ 0.1
CXCL12-208ENST00000496375 PDCD11Q14690 1871 aaKnown RBP15.69■□□□□ 0.1
CXCL12-208ENST00000496375 WDR27A2RRH5 827 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 TOM1L1O75674 476 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 DCNP07585 359 aaKnown RBP15.69■□□□□ 0.1
CXCL12-208ENST00000496375 PLA2G4BP0C869 781 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 MAPTP10636 758 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms