RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 BIRC3Q13489 604 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 ABI1Q8IZP0 508 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 C1orf127Q8N9H9 656 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 CRACR2AQ9BSW2 395 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 KANSL3Q9P2N6 904 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 TUBGCP4Q9UGJ1 667 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 FNDC1Q4ZHG4 1894 aaPredicted RBP23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 GTPBP10A4D1E9 387 aaKnown RBP23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 VNN1O95497 513 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 MYL7Q01449 175 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 PTPN21Q16825 1174 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 BEST2Q8NFU1 509 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 CXorf38Q8TB03 319 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 TAS1R2Q8TE23 839 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 SLC38A7Q9NVC3 462 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 PTPRSQ13332 1948 aa23.53■■□□□ 1.36
ECHDC3-205ENST00000496136 XPOTO43592 962 aaKnown RBP23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 PHACTR2O75167 634 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 LRRN2O75325 713 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 TPM3P06753 285 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 CYP3A5P20815 502 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 ZNF75DP51815 510 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 KCNMA1Q12791 1236 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 CETN1Q12798 172 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 GRIK3Q13003 919 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 FBXL13Q8NEE6 735 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 URGCPQ8TCY9 931 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 ERGIC2Q96RQ1 377 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 SIX4Q9UIU6 781 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 EPC2Q52LR7 807 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 FAM117BQ6P1L5 589 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 GBP6Q6ZN66 633 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 LMO3Q8TAP4 145 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 SEMA4DQ92854 862 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 GOLGA2P5Q9HBQ8 144 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 TBC1D13Q9NVG8 400 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 RAB20Q9NX57 234 aa23.52■■□□□ 1.36
ECHDC3-205ENST00000496136 H0YGN5 161 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 ADCY5O95622 1261 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 ITGB3P05106 788 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 EXOC3L4Q17RC7 722 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 RASIP1Q5U651 963 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 ZNF280BQ86YH2 543 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 ZNF689Q96CS4 500 aaPredicted RBP23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 ITGA11Q9UKX5 1188 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 SLC4A7Q9Y6M7 1214 aa23.51■■□□□ 1.35
ECHDC3-205ENST00000496136 TBKBP1A7MCY6 615 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 DDHD2O94830 711 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 HLA-DRAP01903 254 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 SLC9A1P19634 815 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 PBX1P40424 430 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 NCOA4Q13772 614 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 SYCP1Q15431 976 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 C9orf50Q5SZB4 431 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 EHBP1Q8NDI1 1231 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 RSPH1Q8WYR4 309 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 MRFAP1L1Q96HT8 127 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 GCNT4Q9P109 453 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 PDE4DIPQ5VU43 2346 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 A0A1W2PQC6 194 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 KRT19P08727 400 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 PON1P27169 355 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 RNASELQ05823 741 aaKnown RBP23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 TRPC3Q13507 836 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 GDF15Q99988 308 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 MTIF3Q9H2K0 278 aaKnown RBP23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 SIK3Q9Y2K2 1263 aa23.5■■□□□ 1.35
ECHDC3-205ENST00000496136 SCN1AP35498 2009 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 ANO9A1A5B4 782 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 GJB5O95377 273 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 LRPAP1P30533 357 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 KLK7P49862 253 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 MYL6P60660 151 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 RBP5P82980 135 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 DSC1Q08554 894 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 TUSC3Q13454 348 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 C9orf57Q5W0N0 161 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 PHOSPHO2Q8TCD6 241 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 RC3H2Q9HBD1 1191 aaKnown RBP23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 CACNG4Q9UBN1 327 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 AGAP1Q9UPQ3 857 aa23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 TNRC18O15417 2968 aaPredicted RBP23.49■■□□□ 1.35
ECHDC3-205ENST00000496136 PIRO00625 290 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 B4GALT3O60512 393 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 POLR2BP30876 1174 aaKnown RBP23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 PIK3CAP42336 1068 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 SHHQ15465 462 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 PAN2Q504Q3 1202 aaKnown RBP23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 TRIM65Q6PJ69 517 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 SLC9A7Q96T83 725 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 PI4K2AQ9BTU6 479 aa23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 MRPL9Q9BYD2 267 aaKnown RBP23.48■■□□□ 1.35
ECHDC3-205ENST00000496136 PPEF2O14830 753 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 SLC34A2O95436 690 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 CLCNKBP51801 687 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 SGSM1Q2NKQ1 1148 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 DPY19L2P1Q6NXN4 242 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 COLGALT2Q8IYK4 626 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 ELMO3Q96BJ8 720 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms