RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 LRRC19Q9H756 370 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 MRPL47Q9HD33 250 aaKnown RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.521e-6■■■■□ 21.9
CMSS1-208ENST00000496116 PCDHB4Q9Y5E5 795 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 ADGRA2Q96PE1 1338 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 MYO1CO00159 1063 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 NDUFAB1O14561 156 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 GAS2O43903 313 aaKnown RBP11.82□□□□□ -0.52
CMSS1-208ENST00000496116 ECEL1O95672 775 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 RARAP10276 462 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 RRM1P23921 792 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 LSP1P33241 339 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 MDH1P40925 334 aaKnown RBP11.82□□□□□ -0.52
CMSS1-208ENST00000496116 CCT5P48643 541 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 PMS2P54278 862 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 WNT7BP56706 349 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 NOP14P78316 857 aaKnown RBP11.82□□□□□ -0.52
CMSS1-208ENST00000496116 CAPSQ13938 189 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 SKIDA1Q1XH10 827 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 KRT71Q3SY84 523 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 TTC27Q6P3X3 843 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 KCNV1Q6PIU1 500 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 TMEM270Q6UE05 265 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
CMSS1-208ENST00000496116 VCPIP1Q96JH7 1222 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 PCYT2Q99447 389 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 DICER1Q9UPY3 1922 aaKnown RBP11.82□□□□□ -0.52
CMSS1-208ENST00000496116 PTPRJQ12913 1337 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 MROH7Q68CQ1 1323 aa11.82□□□□□ -0.52
CMSS1-208ENST00000496116 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SRRM3A6NNA2 597 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 FSCN2O14926 492 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CLTAP09496 248 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 NUDT17P0C025 328 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 MAN1A1P33908 653 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 IREB2P48200 963 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CDR1P51861 262 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 GUCY1A3Q02108 690 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 NCOA4Q13772 614 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SLMAPQ14BN4 828 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SGO2Q562F6 1265 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 IER5Q5VY09 327 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 DENND2CQ68D51 928 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 ZDHHC24Q6UX98 284 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 MON1BQ7L1V2 547 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CROCCP2Q86T23 111 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 ZDHHC14Q8IZN3 488 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 ABRAQ8N0Z2 381 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 TCP11Q8WWU5 503 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 FAM84AQ96KN4 292 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 MRPL4Q9BYD3 311 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 EPN3Q9H201 632 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 GRHL1Q9NZI5 618 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SCINQ9Y6U3 715 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CNTNAP2Q9UHC6 1331 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SLC25A27O95847 323 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CALCAP01258 141 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 HARSP12081 509 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CALCOCO2Q13137 446 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 GRM1Q13255 1194 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 MXD4Q14582 209 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 R3HDM1Q15032 1099 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 PPP1R7Q15435 360 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 KCTD19Q17RG1 926 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CPNE8Q86YQ8 564 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 WDR49Q8IV35 697 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 BRSK2Q8IWQ3 736 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 ZBTB8OSQ8IWT0 167 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 RBBP8NLQ8NC74 664 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 SLCO2A1Q92959 643 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 TCHPQ9BT92 498 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 PAGR1Q9BTK6 254 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 APOBEC3GQ9HC16 384 aaKnown RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 ADAM22Q9P0K1 906 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 FEZ2Q9UHY8 353 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-208ENST00000496116 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
CMSS1-208ENST00000496116 TCRBV7S2A1N4TA0A589 114 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 NOP56O00567 594 aaKnown RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 TOM1L1O75674 476 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PPP2R2AP63151 447 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 SURF1Q15526 300 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 ZBTB41Q5SVQ8 909 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 B4GALNT4Q76KP1 1039 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 GRK7Q8WTQ7 553 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 ADARB2Q9NS39 739 aaKnown RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 NOVA2Q9UNW9 492 aaKnown RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 A0A0G2JLL6 359 aaPredicted RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 THAP12O43422 761 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms