RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 TDGQ13569 410 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 ENOX2Q16206 610 aaKnown RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 KYAT1Q16773 422 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 ZBTB41Q5SVQ8 909 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 AXDND1Q5T1B0 1012 aaPredicted RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 IER5LQ5T953 404 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 RRAGBQ5VZM2 374 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 SLC8B1Q6J4K2 584 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 SLC39A4Q6P5W5 647 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 ANKS3Q6ZW76 656 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 RTL10Q7L3V2 364 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 MAP4K3Q8IVH8 894 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 RASSF8Q8NHQ8 419 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 STAMQ92783 540 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 BICD1Q96G01 975 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 MYADMQ96S97 322 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 STRA6Q9BX79 667 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 KCNK12Q9HB15 430 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 PIDD1Q9HB75 910 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS52-221ENST00000495755 STK17AQ9UEE5 414 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 CCDC39Q9UFE4 941 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 TUBGCP4Q9UGJ1 667 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 CDY1Q9Y6F8 540 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 TRIP11Q15643 1979 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 C2orf16Q68DN1 1984 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 FRYLO94915 3013 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 ZDBF2Q9HCK1 2354 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 USP34Q70CQ2 3546 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 PIEZO1Q92508 2521 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 VWA8A3KMH1 1905 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 MTCL1Q9Y4B5 1905 aaKnown RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 A0A087X0B3 334 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 MYMKA6NI61 221 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 LACTBL1A8MY62 500 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ANKRD63C9JTQ0 380 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ANHXE9PGG2 379 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 SYN3O14994 580 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 OGTO15294 1046 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 PPP1R37O75864 691 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ABLIM3O94929 683 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 PDGFBP01127 241 aaPredicted RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 LAMP2P13473 410 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 CYP3A5P20815 502 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 FSHRP23945 695 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 AVPR2P30518 371 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 LRPAP1P30533 357 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 GBP2P32456 591 aaPredicted RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 MATR3P43243 847 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS52-221ENST00000495755 VCPP55072 806 aaKnown RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 SPAG1Q07617 926 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ZC2HC1CQ53FD0 456 aaPredicted RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 PPM1LQ5SGD2 360 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 VARS2Q5ST30 1063 aaKnown RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 LIN9Q5TKA1 542 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 CCDC73Q6ZRK6 1079 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 DYMQ7RTS9 669 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ZNF720Q7Z2F6 126 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 GRASPQ7Z6J2 395 aaPredicted RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 SUGP1Q8IWZ8 645 aaKnown RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 TMEM130Q8N3G9 435 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 KRI1Q8N9T8 703 aaKnown RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 LINC00301Q8NCQ3 95 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 PRSS33Q8NF86 280 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ZNF461Q8TAF7 563 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 SLC7A14Q8TBB6 771 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 NXPE3Q969Y0 559 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 DNAJC19Q96DA6 116 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 SUSD3Q96L08 255 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 TSPAN18Q96SJ8 248 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 MSTO1Q9BUK6 570 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 PANK2Q9BZ23 570 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ZHX3Q9H4I2 956 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 IGSF9Q9P2J2 1179 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 CPSF3Q9UKF6 684 aaKnown RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 NUB1Q9Y5A7 615 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.86□□□□□ -1.15
VPS52-221ENST00000495755 STYXL1Q9Y6J8 313 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 MYH11P35749 1972 aa7.86□□□□□ -1.15
VPS52-221ENST00000495755 ARHGEF37A1IGU5 675 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 FRMD3A2A2Y4 597 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 TISP43B9A030 160 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 H7C4K7 107 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 M0QZQ0 153 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 CCL16O15467 120 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 XYLBO75191 536 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 GAP43P17677 238 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 HOXD11P31277 338 aaPredicted RBP7.85□□□□□ -1.15
VPS52-221ENST00000495755 TXLNAP40222 546 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 AARSP49588 968 aaKnown RBP eCLIP7.85□□□□□ -1.15
VPS52-221ENST00000495755 NTHL1P78549 312 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 ROR1Q01973 937 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 NHLH1Q02575 133 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 PPP2R3AQ06190 1150 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 SPATA1Q5VX52 437 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 SLFN12LQ6IEE8 588 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 SFR1Q86XK3 245 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 CD302Q8IX05 232 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms