RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 EZH1Q92800 747 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 NLRP4Q96MN2 994 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 FNBP1Q96RU3 617 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 TMEM209Q96SK2 561 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 TTPALQ9BTX7 342 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 CXCL16Q9H2A7 254 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 AGPAT5Q9NUQ2 364 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 PCDHB8Q9UN66 801 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 PCDHB9Q9Y5E1 797 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 MAFBQ9Y5Q3 323 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 CDY1Q9Y6F8 540 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 CENPEQ02224 2701 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CEP192Q8TEP8 1941 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 PLK4O00444 970 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CHADO15335 359 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 HMMRO75330 724 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 SEC24AO95486 1093 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 APBB3O95704 486 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 POU2F2P09086 479 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 ATXN1LP0C7T5 689 aaKnown RBP9.98□□□□□ -0.81
GARNL3-219ENST00000495172 ITGA4P13612 1032 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 AKAP5P24588 427 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 HOXA11P31270 313 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CCR10P46092 362 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 SEMG2Q02383 582 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 RAB33AQ14088 237 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 DMC1Q14565 340 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 SEC23AQ15436 765 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 MAPK6Q16659 721 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CCDC157Q569K6 752 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 MIS18BP1Q6P0N0 1132 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 PDZD4Q76G19 769 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CYB5R4Q7L1T6 521 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 RHPN2Q8IUC4 686 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 NAXDQ8IW45 347 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
GARNL3-219ENST00000495172 SYNPOQ8N3V7 929 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 GSTCDQ8NEC7 633 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 SLITRK6Q9H5Y7 841 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-219ENST00000495172 TOR4AQ9NXH8 423 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 IL17BQ9UHF5 180 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 IPPQ9Y573 584 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CNTNAP2Q9UHC6 1331 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 POLQO75417 2590 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-219ENST00000495172 BSNQ9UPA5 3926 aa9.98□□□□□ -0.81
GARNL3-219ENST00000495172 CABIN1Q9Y6J0 2220 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 I3L4J1 428 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 LRG1P02750 347 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 MLLT6P55198 1093 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-219ENST00000495172 NFKB2Q00653 900 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 CREMQ03060 361 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 FCHO2Q0JRZ9 810 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 SLC23A3Q6PIS1 610 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 SHKBP1Q8TBC3 707 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 RSPH1Q8WYR4 309 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 CPB2Q96IY4 423 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 SMG9Q9H0W8 520 aaKnown RBP9.97□□□□□ -0.81
GARNL3-219ENST00000495172 NXF3Q9H4D5 531 aaKnown RBP9.97□□□□□ -0.81
GARNL3-219ENST00000495172 PSTPIP2Q9H939 334 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 CEP72Q9P209 647 aa9.97□□□□□ -0.81
GARNL3-219ENST00000495172 SF3B1O75533 1304 aaKnown RBP eCLIP9.97□□□□□ -0.81
GARNL3-219ENST00000495172 ZFHX3Q15911 3703 aa9.96□□□□□ -0.81
GARNL3-219ENST00000495172 TEX51A0A1B0GUA7 166 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 MAFGO15525 162 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 MAFO75444 373 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-219ENST00000495172 PRKCBP05771 671 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 GP1BBP13224 206 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 MYF5P13349 255 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 HNRNPLP14866 589 aaKnown RBP eCLIP9.96□□□□□ -0.822e-12■■■■□ 21.9
GARNL3-219ENST00000495172 ARPP19P56211 112 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 PRKCEQ02156 737 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 HSP90AA2PQ14568 343 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-219ENST00000495172 MTERF2Q49AM1 385 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 C4orf17Q53FE4 359 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 USP39Q53GS9 565 aaKnown RBP9.96□□□□□ -0.82
GARNL3-219ENST00000495172 TRIM68Q6AZZ1 485 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 CDR2LQ86X02 465 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-219ENST00000495172 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 MSANTD3Q96H12 275 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 GPATCH3Q96I76 525 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 RNF41Q9H4P4 317 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-219ENST00000495172 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 TRPV4Q9HBA0 871 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 IFT122Q9HBG6 1241 aa9.96□□□□□ -0.82
GARNL3-219ENST00000495172 APOBEC2Q9Y235 224 aaKnown RBP9.96□□□□□ -0.82
GARNL3-219ENST00000495172 CSMD1Q96PZ7 3565 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 SPDYE3A6NKU9 549 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 PRRG1O14668 218 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 ZNF213O14771 459 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 CBFA2T3O75081 653 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 ATG13O75143 517 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 NR1I2O75469 434 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 PRAMEF12O95522 483 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 OATP04181 439 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 C6P13671 934 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 TIE1P35590 1138 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms