RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 STK38Q15208 465 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 ENOX2Q16206 610 aaKnown RBP11.58□□□□□ -0.56
NELFE-213ENST00000494956 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
NELFE-213ENST00000494956 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 HSCBQ8IWL3 235 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 KRI1Q8N9T8 703 aaKnown RBP11.58□□□□□ -0.56
NELFE-213ENST00000494956 LINC00301Q8NCQ3 95 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 ZSWIM2Q8NEG5 633 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
NELFE-213ENST00000494956 RSAD2Q8WXG1 361 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 PBXIP1Q96AQ6 731 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 DNAJC19Q96DA6 116 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 CHAMP1Q96JM3 812 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 UROC1Q96N76 676 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 ZSCAN16Q9H4T2 348 aaPredicted RBP11.58□□□□□ -0.56
NELFE-213ENST00000494956 PIDD1Q9HB75 910 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 WDR6Q9NNW5 1121 aaKnown RBP11.58□□□□□ -0.56
NELFE-213ENST00000494956 HCFC1R1Q9NWW0 138 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 MTRRQ9UBK8 725 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 HCN4Q9Y3Q4 1203 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 CLUHO75153 1309 aa11.58□□□□□ -0.56
NELFE-213ENST00000494956 ZNF318Q5VUA4 2279 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 PIGRP01833 764 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 C8AP07357 584 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 GBP2P32456 591 aaPredicted RBP11.57□□□□□ -0.56
NELFE-213ENST00000494956 MCM4P33991 863 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 ACOT2P49753 483 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 CASP5P51878 434 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 VCPP55072 806 aaKnown RBP11.57□□□□□ -0.56
NELFE-213ENST00000494956 WNT7BP56706 349 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 GTF2BQ00403 316 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 IER5LQ5T953 404 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 GET4Q7L5D6 327 aaPredicted RBP11.57□□□□□ -0.56
NELFE-213ENST00000494956 GRASPQ7Z6J2 395 aaPredicted RBP11.57□□□□□ -0.56
NELFE-213ENST00000494956 MAP4K3Q8IVH8 894 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 GPR65Q8IYL9 337 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 ZDHHC14Q8IZN3 488 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 SLC7A14Q8TBB6 771 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 MSTO1Q9BUK6 570 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 PLEKHA4Q9H4M7 779 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 SLC38A7Q9NVC3 462 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
NELFE-213ENST00000494956 POLIQ9UNA4 740 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 SORCS3Q9UPU3 1222 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 NUB1Q9Y5A7 615 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 TIMM13Q9Y5L4 95 aaPredicted RBP11.57□□□□□ -0.56
NELFE-213ENST00000494956 SCN1AP35498 2009 aa11.57□□□□□ -0.56
NELFE-213ENST00000494956 A0A0B4J269 797 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 H0YCG3 227 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 SPTLC2O15270 562 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 OGTO15294 1046 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 PPP1R37O75864 691 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 HSP90AA1P07900 732 aaKnown RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 NFICP08651 508 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 CLTAP09496 248 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 IDEP14735 1019 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 STAT6P42226 847 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 CDR1P51861 262 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 CREMQ03060 361 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 PPP2R3AQ06190 1150 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 MTMR3Q13615 1198 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 RAB33AQ14088 237 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 ZBTB6Q15916 424 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 PPM1LQ5SGD2 360 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 VARS2Q5ST30 1063 aaKnown RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 AXDND1Q5T1B0 1012 aaPredicted RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 JADE1Q6IE81 842 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 SV2BQ7L1I2 683 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 OTOP3Q7RTS5 596 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 ZNF720Q7Z2F6 126 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 GLIS3Q8NEA6 775 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 HPS3Q969F9 1004 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 FAM84AQ96KN4 292 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 RPF1Q9H9Y2 349 aaKnown RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 ZDHHC7Q9NXF8 308 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 CPSF3Q9UKF6 684 aaKnown RBP11.56□□□□□ -0.56
NELFE-213ENST00000494956 USTQ9Y2C2 406 aa11.56□□□□□ -0.56
NELFE-213ENST00000494956 TCHHQ07283 1943 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
NELFE-213ENST00000494956 WDR27A2RRH5 827 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 TBC1D4O60343 1298 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 F13A1P00488 732 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 OR4Q2P0C623 313 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ZSCAN22P10073 491 aaPredicted RBP11.55□□□□□ -0.56
NELFE-213ENST00000494956 CASP1P29466 404 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ADSSP30520 456 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 TXLNAP40222 546 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ROR1Q01973 937 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 LIN9Q5TKA1 542 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 SCARA3Q6AZY7 606 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 SHC4Q6S5L8 630 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ANKS3Q6ZW76 656 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms