RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 GJB7Q6PEY0 223 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 MRPL10Q7Z7H8 261 aaKnown RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 ARHGEF19Q8IW93 802 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 HELQQ8TDG4 1101 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 TAF4BQ92750 862 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 JAKMIP2Q96AA8 810 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 AJAP1Q9UKB5 411 aaPredicted RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 ITGA11Q9UKX5 1188 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 HES2Q9Y543 173 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 BZW2Q9Y6E2 419 aaKnown RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 SOWAHDA6NJG2 315 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 LRRN2O75325 713 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 ITGA4P13612 1032 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 KCNE1P15382 129 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 TBXAS1P24557 533 aaPredicted RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 ATICP31939 592 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 SOX5P35711 763 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 PRKCIP41743 596 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 NOP14P78316 857 aaKnown RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 TLE2Q04725 743 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 MBTPS1Q14703 1052 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 DRAP1Q14919 205 aaPredicted RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 ZBTB6Q15916 424 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 ARHGAP44Q17R89 818 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 TRIM60Q495X7 471 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 E4F1Q66K89 784 aaPredicted RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 CCDC170Q8IYT3 715 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 PPM1KQ8N3J5 372 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 DIS3LQ8TF46 1054 aaKnown RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 FAXDC2Q96IV6 333 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 FAM84AQ96KN4 292 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 CHP1Q99653 195 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 APOL6Q9BWW8 343 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 FTHL17Q9BXU8 183 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 IFIH1Q9BYX4 1025 aaKnown RBP11.87□□□□□ -0.51
PKP4-215ENST00000494945 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 GPR88Q9GZN0 384 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 C11orf49Q9H6J7 331 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 KCND1Q9NSA2 647 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 DPP3Q9NY33 737 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
PKP4-215ENST00000494945 KIAA1671Q9BY89 1806 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 A0A0U1RQF3 1178 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 SSU72P8A0A1W2PR75 194 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 CCP110O43303 1012 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 MGEA5O60502 916 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 STAU1O95793 577 aaKnown RBP11.86□□□□□ -0.51
PKP4-215ENST00000494945 CST3P01034 146 aaPredicted RBP11.86□□□□□ -0.51
PKP4-215ENST00000494945 CYP3A5P20815 502 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 AKAP5P24588 427 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 ANXA13P27216 316 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 CYLC1P35663 651 aaPredicted RBP11.86□□□□□ -0.51
PKP4-215ENST00000494945 RBP5P82980 135 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 FAAP100Q0VG06 881 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 HGSNATQ68CP4 663 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 RAD9BQ6WBX8 426 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 IRF2BP2Q7Z5L9 587 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 NECAB2Q7Z6G3 386 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 C1orf127Q8N9H9 656 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 BEST2Q8NFU1 509 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 SHC3Q92529 594 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 TATDN2Q93075 761 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 PGBD4Q96DM1 585 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 KREMEN1Q96MU8 473 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 ADAM2Q99965 735 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 PI4K2AQ9BTU6 479 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 VRTNQ9H8Y1 702 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
PKP4-215ENST00000494945 UBN1Q9NPG3 1134 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 ARHGAP20Q9P2F6 1191 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 SIX4Q9UIU6 781 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 UBQLN1Q9UMX0 589 aaKnown RBP11.86□□□□□ -0.51
PKP4-215ENST00000494945 GIT1Q9Y2X7 761 aa11.86□□□□□ -0.51
PKP4-215ENST00000494945 R3HCC1Q9Y3T6 440 aaKnown RBP11.86□□□□□ -0.51
PKP4-215ENST00000494945 BRCA2P51587 3418 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 SMIM28A0A1B0GU29 152 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 FOXN3O00409 490 aaPredicted RBP11.85□□□□□ -0.51
PKP4-215ENST00000494945 ZSCAN12O43309 604 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 ITGB3P05106 788 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 KRT19P08727 400 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 MYL6P60660 151 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 KLHL30Q0D2K2 578 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 CUL2Q13617 745 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 ZNF699Q32M78 642 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 TDRD12Q587J7 1177 aaKnown RBP11.85□□□□□ -0.51
PKP4-215ENST00000494945 PLEKHG4Q58EX7 1191 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 FAM71AQ8IYT1 594 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 CXorf38Q8TB03 319 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 APBB2Q92870 758 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 PAWRQ96IZ0 340 aaKnown RBP11.85□□□□□ -0.51
PKP4-215ENST00000494945 CCDC42Q96M95 316 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 ZMAT2Q96NC0 199 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms