RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 SLC44A3Q8N4M1 653 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 FLCNQ8NFG4 579 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 STAMQ92783 540 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 FGF14Q92915 247 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 UROC1Q96N76 676 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 ACAP3Q96P50 834 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 FIZ1Q96SL8 496 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 TCHPQ9BT92 498 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 TIPINQ9BVW5 301 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 IKZF4Q9H2S9 585 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 TOPORSQ9NS56 1045 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 DPP7Q9UHL4 492 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 NUMBLQ9Y6R0 609 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 OTOGLQ3ZCN5 2332 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 F5P12259 2224 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-208ENST00000494728 TISP43B9A030 160 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 ANHXE9PGG2 379 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 TBC1D4O60343 1298 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 FSHRP23945 695 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 GUCY2FP51841 1108 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 MCL1Q07820 350 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 MCM6Q14566 821 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
VTI1A-208ENST00000494728 SLC5A9Q2M3M2 681 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 SPECC1Q5M775 1068 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 PPM1LQ5SGD2 360 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
VTI1A-208ENST00000494728 AXDND1Q5T1B0 1012 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-208ENST00000494728 FAM173BQ6P4H8 233 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 SLC39A4Q6P5W5 647 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 GPR152Q8TDT2 470 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
VTI1A-208ENST00000494728 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
VTI1A-208ENST00000494728 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 POLIQ9UNA4 740 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 BACE2Q9Y5Z0 518 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 OBSL1O75147 1896 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
VTI1A-208ENST00000494728 PPEF2O14830 753 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
VTI1A-208ENST00000494728 AOC1P19801 751 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 HOXA9P31269 272 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 MCM2P49736 904 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 ZNF131P52739 623 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 STRN3Q13033 797 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 RESTQ13127 1097 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 PTPAQ15257 358 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 SLC8B1Q6J4K2 584 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 PARM1Q6UWI2 310 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 ZPBP2Q6X784 338 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 APBB1IPQ7Z5R6 666 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-208ENST00000494728 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 ING5Q8WYH8 240 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 RAD54LQ92698 747 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 FGF13Q92913 245 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 AK8Q96MA6 479 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 PRRX2Q99811 253 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 MFSD1Q9H3U5 465 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 KCND2Q9NZV8 630 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-208ENST00000494728 CLIC4Q9Y696 253 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
VTI1A-208ENST00000494728 CEP250Q9BV73 2442 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 TTC26A0AVF1 554 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 K7ENM7 598 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 SEC24AO95486 1093 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 VNN2O95498 520 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 POU2F2P09086 479 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 SRFP11831 508 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 NMT1P30419 496 aaKnown RBP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 CLCN5P51795 746 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 MRPL58Q14197 206 aaKnown RBP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 ENOX2Q16206 610 aaKnown RBP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 PDXDC1Q6P996 788 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 ANKS3Q6ZW76 656 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 KCTD17Q8N5Z5 321 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 KCNN1Q92952 543 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 EPSTI1Q96J88 318 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 FBXO2Q9UK22 296 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 CDH7Q9ULB5 785 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 ODF2LQ9ULJ1 636 aa12.71□□□□□ -0.37
VTI1A-208ENST00000494728 NUP210Q8TEM1 1887 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 KIF26AQ9ULI4 1882 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-208ENST00000494728 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 HNRNPDLO14979 420 aaKnown RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 SYN3O14994 580 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 CLDN3O15551 220 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 ABLIM3O94929 683 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 PIGRP01833 764 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms