RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLC5A2P31639 672 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 PHKA2P46019 1235 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 PLTPP55058 493 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 POLR2FP61218 127 aaKnown RBP5.09□□□□□ -1.59
PRKD3-210ENST00000494667 PSMC1P62191 440 aaKnown RBP5.09□□□□□ -1.59
PRKD3-210ENST00000494667 TRIM28Q13263 835 aaKnown RBP5.09□□□□□ -1.59
PRKD3-210ENST00000494667 NFIL3Q16649 462 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 GJC2Q5T442 439 aaPredicted RBP5.09□□□□□ -1.59
PRKD3-210ENST00000494667 FYB2Q5VWT5 728 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 ALKBH5Q6P6C2 394 aaKnown RBP5.09□□□□□ -1.59
PRKD3-210ENST00000494667 SLC2A7Q6PXP3 512 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 MFSD6Q6ZSS7 791 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 CENPUQ71F23 418 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 MIGA2Q7L4E1 593 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 OTUD6AQ7L8S5 288 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 DHDDSQ86SQ9 333 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 TXNDC2Q86VQ3 553 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 TICAM1Q8IUC6 712 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 METTL25Q8N6Q8 603 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 EME1Q96AY2 570 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 MYL10Q9BUA6 226 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 MAK16Q9BXY0 300 aaKnown RBP5.09□□□□□ -1.59
PRKD3-210ENST00000494667 VPS11Q9H270 941 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 EBF3Q9H4W6 596 aa5.09□□□□□ -1.59
PRKD3-210ENST00000494667 KCPQ6ZWJ8 1503 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 COL18A1P39060 1754 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 FAM196BA6NMK8 535 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 EIF4E1BA6NMX2 242 aaKnown RBP5.09□□□□□ -1.6
PRKD3-210ENST00000494667 GSG1L2A8MUP6 293 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 FBP2O00757 339 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 PDE5AO76074 875 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 DHRS4L1P0CG22 281 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 SCG2P13521 617 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 PDE6AP16499 860 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 COILP38432 576 aaPredicted RBP5.09□□□□□ -1.6
PRKD3-210ENST00000494667 NR1H2P55055 460 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 MCCD1P59942 119 aaPredicted RBP5.09□□□□□ -1.6
PRKD3-210ENST00000494667 SCARF1Q14162 830 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 TXNRD1Q16881 649 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 TMEM119Q4V9L6 283 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 HERC4Q5GLZ8 1057 aaPredicted RBP5.09□□□□□ -1.6
PRKD3-210ENST00000494667 HYIQ5T013 277 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 UBAP2Q5T6F2 1119 aaKnown RBP5.09□□□□□ -1.6
PRKD3-210ENST00000494667 TTC27Q6P3X3 843 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 MPRIPQ6WCQ1 1025 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 OTOAQ7RTW8 1153 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 LRRC6Q86X45 466 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 ABTB2Q8N961 1025 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 BBOF1Q8ND07 529 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 ADAMTS16Q8TE57 1224 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 LSM14BQ9BX40 385 aaKnown RBP5.09□□□□□ -1.6
PRKD3-210ENST00000494667 TRIM55Q9BYV6 548 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 TANGO6Q9C0B7 1094 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 KLHL4Q9C0H6 718 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 S100A14Q9HCY8 104 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 ARHGEF38Q9NXL2 777 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 PCDHA4Q9UN74 947 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 PPME1Q9Y570 386 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 WASF2Q9Y6W5 498 aa5.09□□□□□ -1.6
PRKD3-210ENST00000494667 FAM205AQ6ZU69 1335 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 RASA4BC9J798 803 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 RASA4O43374 803 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 IDH1O75874 414 aaKnown RBP5.08□□□□□ -1.6
PRKD3-210ENST00000494667 UQCRFS1P1P0C7P4 283 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 CREB1P16220 341 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 CDH2P19022 906 aaPredicted RBP5.08□□□□□ -1.6
PRKD3-210ENST00000494667 LMNB1P20700 586 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 GCAP28676 217 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 PRDX6P30041 224 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 LRRC14Q15048 493 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 PDK3Q15120 406 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 TGFBIQ15582 683 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 HLFQ16534 295 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.08□□□□□ -1.6
PRKD3-210ENST00000494667 RBM44Q6ZP01 1051 aaKnown RBP5.08□□□□□ -1.6
PRKD3-210ENST00000494667 EPM2AIP1Q7L775 607 aaPredicted RBP5.08□□□□□ -1.6
PRKD3-210ENST00000494667 FRMD5Q7Z6J6 570 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 RHOT2Q8IXI1 618 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 CYP4X1Q8N118 509 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 PTCD2Q8WV60 388 aaKnown RBP5.08□□□□□ -1.6
PRKD3-210ENST00000494667 STARD8Q92502 1023 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 HPS3Q969F9 1004 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 NLRP3Q96P20 1036 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 DOK1Q99704 481 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 NEURL2Q9BR09 285 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 MXD3Q9BW11 206 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 OSBPL6Q9BZF3 934 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 GBA3Q9H227 469 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 KCNK13Q9HB14 408 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 PICK1Q9NRD5 415 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 ARL8BQ9NVJ2 186 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.08□□□□□ -1.62e-6■■■□□ 16.9
PRKD3-210ENST00000494667 SNX24Q9Y343 169 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 AK5Q9Y6K8 562 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 ZNF532Q9HCE3 1301 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 TRIM64A6NGJ6 449 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 TM9SF1O15321 606 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 GYG2O15488 501 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 TNFAIP8O95379 198 aa5.08□□□□□ -1.6
PRKD3-210ENST00000494667 ZCCHC18P0CG32 403 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms