RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TBXAS1P24557 533 aaPredicted RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 CCND3P30281 292 aaPredicted RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 ATICP31939 592 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 ZNF200P98182 395 aaPredicted RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 FMO1Q01740 532 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 NCOA4Q13772 614 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 KIZQ2M2Z5 673 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 TRIM71Q2Q1W2 868 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 DCAF4L1Q3SXM0 396 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 ZNF568Q3ZCX4 644 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 GNASQ5JWF2 1037 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 CCDC122Q5T0U0 273 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 UBXN11Q5T124 520 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 SLC27A1Q6PCB7 646 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 LIMS2Q7Z4I7 341 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 TMEM192Q8IY95 271 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 SLC35F6Q8N357 371 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 CEP120Q8N960 986 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 PCSK9Q8NBP7 692 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 TRIM58Q8NG06 486 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 TMEM40Q8WWA1 233 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 DNAJB3Q8WWF6 145 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 ERO1AQ96HE7 468 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 PCDHB18PQ96TA0 734 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 SEZ6LQ9BYH1 1024 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 BCO2Q9BYV7 579 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 CELF4Q9BZC1 486 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 RPF1Q9H9Y2 349 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 ABCB6Q9NP58 842 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 LZTFL1Q9NQ48 299 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 ANKFY1Q9P2R3 1169 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 TRIM10Q9UDY6 481 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 DDX20Q9UHI6 824 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 CDC23Q9UJX2 597 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 NUB1Q9Y5A7 615 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 MRFAP1Q9Y605 127 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 MROH7Q68CQ1 1323 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CYP26A1O43174 497 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 FKTNO75072 461 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CAND2O75155 1236 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CSDE1O75534 798 aaKnown RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 SGPL1O95470 568 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PGK1P00558 417 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CYP1A1P04798 512 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 ASGR1P07306 291 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 C6orf222P0C671 652 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 TMEM253P0C7T8 217 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PNMA6AP0CW24 399 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 UNGP13051 313 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 KCNE1P15382 129 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CASQ1P31415 396 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 BPIFB4P59827 614 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 NOP14P78316 857 aaKnown RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 CDR2Q01850 454 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CUL2Q13617 745 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 ARHGEF6Q15052 776 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 KCNA10Q16322 511 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 SEZ6Q53EL9 994 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 TDRD12Q587J7 1177 aaKnown RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 WDR44Q5JSH3 913 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 ZNF569Q5MCW4 686 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 DNTTIP2Q5QJE6 756 aaKnown RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 GPR153Q6NV75 609 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 NOTUMQ6P988 496 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CXCL17Q6UXB2 119 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 ZNF572Q7Z3I7 529 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 ZBTB33Q86T24 672 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 NOP9Q86U38 636 aaKnown RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 VPS36Q86VN1 386 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PALB2Q86YC2 1186 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 THNSL1Q8IYQ7 743 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PPM1KQ8N3J5 372 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 C7orf31Q8N865 590 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 LRRC57Q8N9N7 239 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CD99L2Q8TCZ2 262 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 NLRP7Q8WX94 980 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 ACAP3Q96P50 834 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 TCHPQ9BT92 498 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PI4K2AQ9BTU6 479 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PACSIN1Q9BY11 444 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 SENP6Q9GZR1 1112 aaPredicted RBP7.3□□□□□ -1.24
MSH5-217ENST00000494458 DEF6Q9H4E7 631 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 XPNPEP3Q9NQH7 507 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CHST12Q9NRB3 414 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 CNTN3Q9P232 1028 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 GUCA1BQ9UMX6 200 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 TFR2Q9UP52 801 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 JRKLQ9Y4A0 524 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 PCDHB2Q9Y5E7 798 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 ANK1P16157 1881 aa7.3□□□□□ -1.24
MSH5-217ENST00000494458 NCANO14594 1321 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 KAT6AQ92794 2004 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CTAGE9A4FU28 777 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms