RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ARHGAP28Q9P2N2 729 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 DNM3Q9UQ16 869 aa19.05■□□□□ 0.64
COL9A1-210ENST00000493682 TRIP11Q15643 1979 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 PP2D1A8MPX8 630 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 PODXLO00592 558 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 PRRG1O14668 218 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 TBC1D4O60343 1298 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 ECI2O75521 394 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 ABLIM3O94929 683 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 KCNE1P15382 129 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 CD72P21854 359 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 PROZP22891 400 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 TOB1P50616 345 aaPredicted RBP19.04■□□□□ 0.64
COL9A1-210ENST00000493682 POTEHQ6S545 545 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 KIAA2013Q8IYS2 634 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 FAM184AQ8NB25 1140 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 ACAP3Q96P50 834 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 RUSC1Q9BVN2 902 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 PLA2G2FQ9BZM2 168 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 LTB4R2Q9NPC1 389 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 KMT5AQ9NQR1 393 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 PCDHB6Q9Y5E3 794 aa19.04■□□□□ 0.64
COL9A1-210ENST00000493682 WDR27A2RRH5 827 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 ABLIM1O14639 778 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 LRG1P02750 347 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 MCF2P10911 925 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 CEBPBP17676 345 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 PTPN2P17706 415 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 U2AF2P26368 475 aaKnown RBP eCLIP19.03■□□□□ 0.64
COL9A1-210ENST00000493682 ELF1P32519 619 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 ARPP19P56211 112 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 MAPK7Q13164 816 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 C18orf25Q96B23 403 aaPredicted RBP19.03■□□□□ 0.64
COL9A1-210ENST00000493682 ZSCAN31Q96LW9 406 aaPredicted RBP19.03■□□□□ 0.64
COL9A1-210ENST00000493682 DRC1Q96MC2 740 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 TCHPQ9BT92 498 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 CNTN3Q9P232 1028 aa19.03■□□□□ 0.64
COL9A1-210ENST00000493682 RBM19Q9Y4C8 960 aaKnown RBP19.03■□□□□ 0.64
COL9A1-210ENST00000493682 EP300Q09472 2414 aaPredicted RBP19.02■□□□□ 0.64
COL9A1-210ENST00000493682 MIA3Q5JRA6 1907 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 SYN3O14994 580 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 MEFVO15553 781 aaPredicted RBP19.02■□□□□ 0.64
COL9A1-210ENST00000493682 LAMTOR5O43504 91 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 ATF2P15336 505 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 CDC25AP30304 524 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 RPL9P32969 192 aaKnown RBP19.02■□□□□ 0.64
COL9A1-210ENST00000493682 MRPL58Q14197 206 aaKnown RBP19.02■□□□□ 0.64
COL9A1-210ENST00000493682 IL17AQ16552 155 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 ZNF528Q3MIS6 628 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 ZBTB41Q5SVQ8 909 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 KRT79Q5XKE5 535 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 TANGO2Q6ICL3 276 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 RINT1Q6NUQ1 792 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 MPZL3Q6UWV2 235 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 C1orf186Q6ZWK4 172 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 KCNK18Q7Z418 384 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 TCEAL8Q8IYN2 117 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 RUBCNQ92622 972 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 RMDN1Q96DB5 314 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 HINFPQ9BQA5 517 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 CORO1BQ9BR76 489 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 C17orf75Q9HAS0 396 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 CYP4F11Q9HBI6 524 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 FBXL5Q9UKA1 691 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 FBXO4Q9UKT5 387 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 NUB1Q9Y5A7 615 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 CACNA1IQ9P0X4 2223 aa19.02■□□□□ 0.64
COL9A1-210ENST00000493682 FRYLO94915 3013 aa19.02■□□□□ 0.63
COL9A1-210ENST00000493682 FANCMQ8IYD8 2048 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 H7C4K7 107 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 SLC16A4O15374 487 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 SEC24AO95486 1093 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 HARSP12081 509 aaKnown RBP19.01■□□□□ 0.63
COL9A1-210ENST00000493682 MAGEA9P43362 315 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 PRSS36Q5K4E3 855 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 DCLK2Q8N568 766 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 SUMF1Q8NBK3 374 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 CLDN23Q96B33 292 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 ELSPBP1Q96BH3 223 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 TCEAL4Q96EI5 215 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 ZBTB45Q96K62 511 aaPredicted RBP19.01■□□□□ 0.63
COL9A1-210ENST00000493682 MMTAG2Q9BU76 263 aaKnown RBP19.01■□□□□ 0.63
COL9A1-210ENST00000493682 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
COL9A1-210ENST00000493682 DMXL1Q9Y485 3027 aa19.01■□□□□ 0.63
COL9A1-210ENST00000493682 SFI1A8K8P3 1242 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 LAD1O00515 517 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 KINO60870 393 aaKnown RBP19■□□□□ 0.63
COL9A1-210ENST00000493682 FCARP24071 287 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 TARSP26639 723 aaKnown RBP19■□□□□ 0.63
COL9A1-210ENST00000493682 PRPHP41219 470 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 CSTF1Q05048 431 aaKnown RBP19■□□□□ 0.63
COL9A1-210ENST00000493682 CTXN3Q4LDR2 81 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 ZNF852Q6ZMS4 543 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 SUSD3Q96L08 255 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 NELL2Q99435 816 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 NTPCRQ9BSD7 190 aaKnown RBP19■□□□□ 0.63
COL9A1-210ENST00000493682 HEBP1Q9NRV9 189 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 INSL5Q9Y5Q6 135 aa19■□□□□ 0.63
COL9A1-210ENST00000493682 SHISA7A6NL88 538 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms