RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PDZD4Q76G19 769 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 ZBTB8OSQ8IWT0 167 aa15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 TCEAL8Q8IYN2 117 aa15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 CCDC43Q96MW1 224 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 EIF2AK1Q9BQI3 630 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 ADPGKQ9BRR6 497 aa15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 CXCL16Q9H2A7 254 aa15.72■□□□□ 0.11
PRPF40A-211ENST00000493468 PRRG1O14668 218 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 CPLX1O14810 134 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.116e-6■■■■■ 31.4
PRPF40A-211ENST00000493468 ATF2P15336 505 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 PSMA5P28066 241 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 ELF1P32519 619 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 UPP1Q16831 310 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 N4BP2L1Q5TBK1 243 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 FAM160A2Q8N612 972 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 LEMD2Q8NC56 503 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 TCEAL4Q96EI5 215 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 AIFM3Q96NN9 605 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 PPP1R10Q96QC0 940 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 CORO1BQ9BR76 489 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 C2orf40Q9H1Z8 148 aa15.71■□□□□ 0.11
PRPF40A-211ENST00000493468 NUP210Q8TEM1 1887 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 NRG2O14511 850 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 ZNF263O14978 683 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 CDC45O75419 566 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 CCR2P41597 374 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 CLCNKBP51801 687 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 EPHA5P54756 1037 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 DCAF4L1Q3SXM0 396 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 CPLX2Q6PUV4 134 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 MFSD6LQ8IWD5 586 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 E2F7Q96AV8 911 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 ZNF274Q96GC6 653 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 LOXL4Q96JB6 756 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 KCNJ14Q9UNX9 436 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 INSL5Q9Y5Q6 135 aa15.7■□□□□ 0.1
PRPF40A-211ENST00000493468 ASPMQ8IZT6 3477 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 TTLL13PA6NNM8 815 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 ACKR2O00590 384 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 PROS1P07225 676 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 IGFBP6P24592 240 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 CCNE1P24864 410 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 SRSF5Q13243 272 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 MAPK6Q16659 721 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 AASDHQ4L235 1098 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 DGKKQ5KSL6 1271 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 CYP4A22Q5TCH4 519 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 TPGS2Q68CL5 300 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 PIK3AP1Q6ZUJ8 805 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 WDR5BQ86VZ2 330 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 NOSTRINQ8IVI9 506 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 ELMOD1Q8N336 334 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 CCDC113Q9H0I3 377 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 C8orf33Q9H7E9 229 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 MAFFQ9ULX9 164 aa15.69■□□□□ 0.1
PRPF40A-211ENST00000493468 CITO14578 2027 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 ZZEF1O43149 2961 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 SYN3O14994 580 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 MOSPD3O75425 235 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 PRKCBP05771 671 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 ZNF806P0C7X5 589 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 KCNA4P22459 653 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 IQCEQ6IPM2 695 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 CEP68Q76N32 757 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 ZSCAN18Q8TBC5 510 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 ZSWIM3Q96MP5 696 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 CYP4F11Q9HBI6 524 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 GPRC5CQ9NQ84 441 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 PCDHA12Q9UN75 941 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 SDK1Q7Z5N4 2213 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 NCANO14594 1321 aa15.68■□□□□ 0.1
PRPF40A-211ENST00000493468 H7C4K7 107 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 I3L4J1 428 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 CHADO15335 359 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 EPN2O95208 641 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 SEC24AO95486 1093 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 XBP1P17861 261 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 VIPR2P41587 438 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 BRCC3P46736 316 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 FCHO2Q0JRZ9 810 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 MRPL58Q14197 206 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 GLRA4Q5JXX5 417 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 SYNPOQ8N3V7 929 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 C12orf50Q8NA57 414 aaPredicted RBP15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 CSGALNACT1Q8TDX6 532 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 PIGOQ8TEQ8 1089 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 ASAH2Q9NR71 780 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 GDAQ9Y2T3 454 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 EML5Q05BV3 1969 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
PRPF40A-211ENST00000493468 SPEGQ15772 3267 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 LAMA1P25391 3075 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms