RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 AMACRQ9UHK6 382 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 HACL1Q9UJ83 578 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 HIST1H2AGP0C0S8 130 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-206ENST00000493232 GFAPP14136 432 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 ITIH2P19823 946 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 HIST1H2ADP20671 130 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 ACOT2P49753 483 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 PATL1Q86TB9 770 aaKnown RBP17.16■□□□□ 0.34
BRAT1-206ENST00000493232 MFN1Q8IWA4 741 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 HIST1H2AHQ96KK5 128 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 HIST1H2AJQ99878 128 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 H2AFJQ9BTM1 129 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 ZNF609O15014 1411 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 RARBP10826 455 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 UCHL3P15374 230 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 ARHGEF26Q96DR7 871 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 MOV10L1Q9BXT6 1211 aaKnown RBP17.15■□□□□ 0.34
BRAT1-206ENST00000493232 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 PRMT7Q9NVM4 692 aaPredicted RBP17.15■□□□□ 0.34
BRAT1-206ENST00000493232 PCSK1P29120 753 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 SESN2P58004 480 aaPredicted RBP17.15■□□□□ 0.34
BRAT1-206ENST00000493232 RRM2BQ7LG56 351 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 RDM1Q8NG50 284 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 SLC35G2Q8TBE7 412 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 TRABDQ9H4I3 376 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 CACNB2Q08289 660 aaPredicted RBP17.15■□□□□ 0.34
BRAT1-206ENST00000493232 BYSLQ13895 437 aaKnown RBP17.15■□□□□ 0.34
BRAT1-206ENST00000493232 NSMCE4AQ9NXX6 385 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 CHGBP05060 677 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 IL10P22301 178 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 GALCP54803 685 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 PRKCEQ02156 737 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 FOPNLQ96NB1 174 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 MXRA8Q9BRK3 442 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 SUFUQ9UMX1 484 aa17.15■□□□□ 0.34
BRAT1-206ENST00000493232 MAP4P27816 1152 aaKnown RBP17.14■□□□□ 0.33
BRAT1-206ENST00000493232 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 PRPF4O43172 522 aaKnown RBP eCLIP17.14■□□□□ 0.333e-6■■■■□ 20.4
BRAT1-206ENST00000493232 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-206ENST00000493232 PDHBP11177 359 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 ITGA4P13612 1032 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
BRAT1-206ENST00000493232 SCFD2Q8WU76 684 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 SPAG6O75602 509 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 HMOX2P30519 316 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 GYS2P54840 703 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 SYTL3Q4VX76 610 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 MMS22LQ6ZRQ5 1243 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 ZNF677Q86XU0 584 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 SPATA17Q96L03 361 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 TMEM106CQ9BVX2 250 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 NT5C1AQ9BXI3 368 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 ECT2Q9H8V3 914 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 MRGBPQ9NV56 204 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
BRAT1-206ENST00000493232 RASA1P20936 1047 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 HNRNPH2P55795 449 aaKnown RBP17.14■□□□□ 0.33
BRAT1-206ENST00000493232 ZC3H12BQ5HYM0 836 aaKnown RBP17.14■□□□□ 0.33
BRAT1-206ENST00000493232 STKLD1Q8NE28 680 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 CATSPER1Q8NEC5 780 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 TMEM8AQ9HCN3 771 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 ANKEF1Q9NU02 776 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 PCDHB2Q9Y5E7 798 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
BRAT1-206ENST00000493232 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 PDAP1Q13442 181 aaKnown RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 ATF7IP2Q5U623 682 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 LRIG3Q6UXM1 1119 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 PRDM5Q9NQX1 630 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 ARHGAP26Q9UNA1 814 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 HBP1O60381 514 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 SSTR3P32745 418 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 STYK1Q6J9G0 422 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 TRPC7Q9HCX4 862 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 TLR2O60603 784 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 FGFR4P22455 802 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 FLOT2Q14254 428 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 LRRC14Q15048 493 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 NAB2Q15742 525 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 CPA5Q8WXQ8 436 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 RUBCNLQ9H714 662 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 MYMKA6NI61 221 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 RRN3P2A6NIE6 340 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 CDH16O75309 829 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 LRRC8EQ6NSJ5 796 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 C4orf22Q6V702 233 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
BRAT1-206ENST00000493232 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
BRAT1-206ENST00000493232 ANGPT2O15123 496 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 GRIN3BO60391 1043 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 RGS7P49802 495 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms