RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 SPOPLQ6IQ16 392 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 TRAPPC11Q7Z392 1133 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 VPS36Q86VN1 386 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 TMTC1Q8IUR5 882 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 ANKLE1Q8NAG6 615 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 USP38Q8NB14 1042 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 SLC43A3Q8NBI5 491 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 ELMO3Q96BJ8 720 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 FAM81BQ96LP2 452 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.66□□□□□ -1.02
FDPS-218ENST00000492887 IFIH1Q9BYX4 1025 aaKnown RBP8.66□□□□□ -1.02
FDPS-218ENST00000492887 TTYH3Q9C0H2 523 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 MCOLN1Q9GZU1 580 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 HIPK3Q9H422 1215 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 ASB7Q9H672 318 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 AGO3Q9H9G7 860 aaKnown RBP8.66□□□□□ -1.02
FDPS-218ENST00000492887 ERVK-5Q9HDB9 667 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 CHST12Q9NRB3 414 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 PADI3Q9ULW8 664 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 TTC3P53804 2025 aa8.66□□□□□ -1.02
FDPS-218ENST00000492887 CENPFP49454 3210 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 ESPNB1AK53 854 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 AKR1B10O60218 316 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 ZC3H11AO75152 810 aaKnown RBP eCLIP8.65□□□□□ -1.021e-7■■□□□ 12
FDPS-218ENST00000492887 NOL4O94818 638 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 P4HA1P13674 534 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 FERP16591 822 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 TBXAS1P24557 533 aaPredicted RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 GUCY2FP51841 1108 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 CCL23P55773 120 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 YWHAEP62258 255 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 TNNC1P63316 161 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 TLE2Q04725 743 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 SLC10A6Q3KNW5 377 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 ZNF667Q5HYK9 610 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 DNTTIP2Q5QJE6 756 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 UBXN11Q5T124 520 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 NECAB2Q7Z6G3 386 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 KIAA1328Q86T90 577 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 NT5DC4Q86YG4 428 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 BAP1Q92560 729 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 SEPT8Q92599 483 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 ZNF516Q92618 1163 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 SEMA4DQ92854 862 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 LPPQ93052 612 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 SCLYQ96I15 445 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 PAWRQ96IZ0 340 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 CCDC42Q96M95 316 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 ZNF560Q96MR9 790 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 ADAM2Q99965 735 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 PDCL3Q9H2J4 239 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 SIX2Q9NPC8 291 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 RNF19AQ9NV58 838 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 TRMT1Q9NXH9 659 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 DPP3Q9NY33 737 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 AJAP1Q9UKB5 411 aaPredicted RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 LRFN2Q9ULH4 789 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 UBQLN1Q9UMX0 589 aaKnown RBP8.65□□□□□ -1.02
FDPS-218ENST00000492887 PCDHB4Q9Y5E5 795 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 GBF1Q92538 1859 aa8.65□□□□□ -1.02
FDPS-218ENST00000492887 F8VZ95 297 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 RBAK-RBAKDNI3L0D1 243 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 PMM2O15305 246 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 ZSCAN12O43309 604 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 VNN1O95497 513 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 SERPING1P05155 500 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 CLTBP09497 229 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 ATF7P17544 494 aaPredicted RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 CD58P19256 250 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 SOX5P35711 763 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 MLH1P40692 756 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 CDK7P50613 346 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 PDE6CP51160 858 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 MYL6P60660 151 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 RBP5P82980 135 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 POU5F1Q01860 360 aaKnown RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 MTF1Q14872 753 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 SPA17Q15506 151 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 SGSM1Q2NKQ1 1148 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 IER5LQ5T953 404 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 ENOSF1Q7L5Y1 443 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 DEFB128Q7Z7B8 93 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 ABI1Q8IZP0 508 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 C17orf53Q8N3J3 647 aaPredicted RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 SMG8Q8ND04 991 aaKnown RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 KAT5Q92993 513 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 TATDN2Q93075 761 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 DNAJC7Q99615 494 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 CHP1Q99653 195 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 DESI2Q9BSY9 194 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 NHEJ1Q9H9Q4 299 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms