RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 FIZ1Q96SL8 496 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 RPP25Q9BUL9 199 aaKnown RBP20.17■□□□□ 0.82
CHD1L-209ENST00000492728 SLC38A7Q9NVC3 462 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 DAXXQ9UER7 740 aaPredicted RBP20.17■□□□□ 0.82
CHD1L-209ENST00000492728 NUMBLQ9Y6R0 609 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 COL4A3Q01955 1670 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 VPS37CA5D8V6 355 aaPredicted RBP20.16■□□□□ 0.82
CHD1L-209ENST00000492728 FAM189A1O60320 539 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 TBC1D4O60343 1298 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 ZNF131P52739 623 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 ROR1Q01973 937 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 SLC8B1Q6J4K2 584 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 POTEHQ6S545 545 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 ANKS3Q6ZW76 656 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 RAD54LQ92698 747 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 FGF14Q92915 247 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 KCNN1Q92952 543 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 MFSD1Q9H3U5 465 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHD1L-209ENST00000492728 DNMT3BQ9UBC3 853 aaKnown RBP20.16■□□□□ 0.82
CHD1L-209ENST00000492728 CLIC4Q9Y696 253 aa20.16■□□□□ 0.82
CHD1L-209ENST00000492728 WDR27A2RRH5 827 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 POU2F2P09086 479 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 UBA7P41226 1012 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 SMTNP53814 917 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 PTPAQ15257 358 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 FAM173BQ6P4H8 233 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 SLC39A4Q6P5W5 647 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 PARM1Q6UWI2 310 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 HAUS6Q7Z4H7 955 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 FBXL21Q9UKT6 434 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 ODF2LQ9ULJ1 636 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 POLIQ9UNA4 740 aa20.15■□□□□ 0.82
CHD1L-209ENST00000492728 CLDN3O15551 220 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 SLC26A4O43511 780 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 TRAPPC3O43617 180 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 SRFP11831 508 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 AOC1P19801 751 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 LONP1P36776 959 aaKnown RBP20.14■□□□□ 0.81
CHD1L-209ENST00000492728 CLCN5P51795 746 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 GUCY2FP51841 1108 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 RESTQ13127 1097 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 MRPL58Q14197 206 aaKnown RBP20.14■□□□□ 0.81
CHD1L-209ENST00000492728 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 GPR152Q8TDT2 470 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 FGF13Q92913 245 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 CALML4Q96GE6 196 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 LARSQ9P2J5 1176 aaKnown RBP20.14■□□□□ 0.81
CHD1L-209ENST00000492728 CDH7Q9ULB5 785 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 CA14Q9ULX7 337 aa20.14■□□□□ 0.81
CHD1L-209ENST00000492728 VPS13AQ96RL7 3174 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 TTC26A0AVF1 554 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 K7ENM7 598 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 NRG2O14511 850 aaPredicted RBP20.13■□□□□ 0.81
CHD1L-209ENST00000492728 BMP15O95972 392 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 PIGRP01833 764 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 RPL9P32969 192 aaKnown RBP20.13■□□□□ 0.81
CHD1L-209ENST00000492728 NUBP1P53384 320 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 SLC5A9Q2M3M2 681 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 MYCT1Q8N699 235 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 BICD1Q96G01 975 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 SUSD3Q96L08 255 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 IKZF4Q9H2S9 585 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 FBXL5Q9UKA1 691 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 TBX20Q9UMR3 447 aa20.13■□□□□ 0.81
CHD1L-209ENST00000492728 ZFHX2Q9C0A1 2572 aaPredicted RBP20.12■□□□□ 0.81
CHD1L-209ENST00000492728 TISP43B9A030 160 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 SYN3O14994 580 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 XYLBO75191 536 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 ABLIM3O94929 683 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 FAM13AO94988 1023 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 SEC24AO95486 1093 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 NMT1P30419 496 aaKnown RBP20.12■□□□□ 0.81
CHD1L-209ENST00000492728 MCM4P33991 863 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 ZBTB6Q15916 424 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 ENOX2Q16206 610 aaKnown RBP20.12■□□□□ 0.81
CHD1L-209ENST00000492728 UVSSAQ2YD98 709 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 NPAS3Q8IXF0 933 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 ING5Q8WYH8 240 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 ATOH1Q92858 354 aaPredicted RBP20.12■□□□□ 0.81
CHD1L-209ENST00000492728 NXPE3Q969Y0 559 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 PARVGQ9HBI0 331 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 WNT16Q9UBV4 365 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
CHD1L-209ENST00000492728 NUB1Q9Y5A7 615 aa20.12■□□□□ 0.81
CHD1L-209ENST00000492728 LACTBL1A8MY62 500 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 PPEF2O14830 753 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 CLTAP09496 248 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 MARCKSP29966 332 aaPredicted RBP20.11■□□□□ 0.81
CHD1L-209ENST00000492728 LRPAP1P30533 357 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 MATR3P43243 847 aaKnown RBP eCLIP20.11■□□□□ 0.811e-6■■■□□ 17.2
CHD1L-209ENST00000492728 LIG4P49917 911 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 ARPP19P56211 112 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 PABPC1LQ4VXU2 614 aaKnown RBP20.11■□□□□ 0.81
CHD1L-209ENST00000492728 ZNF461Q8TAF7 563 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 LARP4BQ92615 738 aaKnown RBP20.11■□□□□ 0.81
CHD1L-209ENST00000492728 DDX12PQ92771 950 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 KIF12Q96FN5 646 aa20.11■□□□□ 0.81
CHD1L-209ENST00000492728 CCSER1Q9C0I3 900 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms