RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CAVIN1Q6NZI2 390 aaKnown RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 PDXDC1Q6P996 788 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 CD300LGQ6UXG3 332 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 ZNF852Q6ZMS4 543 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 RTL10Q7L3V2 364 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 OXER1Q8TDS5 423 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 MCRS1Q96EZ8 462 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 ZNF274Q96GC6 653 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 EIF2AK1Q9BQI3 630 aaKnown RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 LARP6Q9BRS8 491 aaKnown RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 POLR3FQ9H1D9 316 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 FZD8Q9H461 694 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 AVENQ9NQS1 362 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 LMBRD1Q9NUN5 540 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 GDE1Q9NZC3 331 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 MTRRQ9UBK8 725 aa14.46□□□□□ -0.09
HDAC3-213ENST00000492506 MRPS23Q9Y3D9 190 aaKnown RBP14.46□□□□□ -0.09
HDAC3-213ENST00000492506 FAM205CA6NFA0 338 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 CPLX1O14810 134 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 NCAM2O15394 837 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 RECQL4O94761 1208 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 THP07101 528 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 RHOP08100 348 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 PSMA5P28066 241 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 RARRES1P49788 294 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
HDAC3-213ENST00000492506 NOLC1Q14978 699 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC3-213ENST00000492506 FAM187BQ17R55 369 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 CDCA2Q69YH5 1023 aaPredicted RBP14.45□□□□□ -0.1
HDAC3-213ENST00000492506 PIK3AP1Q6ZUJ8 805 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 SLFN12Q8IYM2 578 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 DNASE1L2Q92874 299 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 ELSPBP1Q96BH3 223 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 CHRDQ9H2X0 955 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 TSPY26PQ9H489 355 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 PDZD7Q9H5P4 517 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 ZSWIM6Q9HCJ5 1215 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 GPRC5CQ9NQ84 441 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 SNTG2Q9NY99 539 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 USP18Q9UMW8 372 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 CDY1Q9Y6F8 540 aa14.45□□□□□ -0.1
HDAC3-213ENST00000492506 A0A087WWV3 80 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 TMEM189-UBE2V1I3L0A0 370 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 EDN1P05305 212 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 CEBPBP17676 345 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 SPEM2Q0P670 501 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 PRSS36Q5K4E3 855 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
HDAC3-213ENST00000492506 PRMT7Q9NVM4 692 aaPredicted RBP14.44□□□□□ -0.1
HDAC3-213ENST00000492506 MRPS17Q9Y2R5 130 aaKnown RBP14.44□□□□□ -0.1
HDAC3-213ENST00000492506 BACE2Q9Y5Z0 518 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.44□□□□□ -0.1
HDAC3-213ENST00000492506 FRYQ5TBA9 3013 aa14.44□□□□□ -0.1
HDAC3-213ENST00000492506 GREB1Q4ZG55 1949 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 ARHGEF37A1IGU5 675 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 GOLGA6L6A8MZA4 724 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 MARCH6O60337 910 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 STK3Q13188 491 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 LPAL2Q16609 132 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 ST3GAL2Q16842 350 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 NOSTRINQ8IVI9 506 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 PIGOQ8TEQ8 1089 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 DDX27Q96GQ7 796 aaKnown RBP14.43□□□□□ -0.1
HDAC3-213ENST00000492506 GMEB2Q9UKD1 530 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 USP20Q9Y2K6 914 aa14.43□□□□□ -0.1
HDAC3-213ENST00000492506 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC3-213ENST00000492506 CITO14578 2027 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 SPAG17Q6Q759 2223 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 LAMA1P25391 3075 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 LRRIQ4A6NIV6 560 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 SLC30A4O14863 429 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 DTNBO60941 627 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 TKTP29401 623 aaKnown RBP14.42□□□□□ -0.1
HDAC3-213ENST00000492506 CLCNKBP51801 687 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 GRM2Q14416 872 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 FAM78AQ5JUQ0 283 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 EEF1DP3Q658K8 133 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 LAIR1Q6GTX8 287 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 MAP4K3Q8IVH8 894 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 CELF5Q8N6W0 485 aaKnown RBP14.42□□□□□ -0.1
HDAC3-213ENST00000492506 C3orf58Q8NDZ4 430 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 BSNDQ8WZ55 320 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 TNFRSF25Q93038 417 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 TCEAL4Q96EI5 215 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 PPP1R10Q96QC0 940 aaKnown RBP14.42□□□□□ -0.1
HDAC3-213ENST00000492506 CCDC113Q9H0I3 377 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 NDRG2Q9UN36 371 aaKnown RBP14.42□□□□□ -0.1
HDAC3-213ENST00000492506 PCDHA12Q9UN75 941 aa14.42□□□□□ -0.1
HDAC3-213ENST00000492506 CACNA1GO43497 2377 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 I3L4J1 428 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 TULP2O00295 520 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 MAN2B1O00754 1011 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 N4BP3O15049 544 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 USO1O60763 962 aaKnown RBP14.41□□□□□ -0.1
HDAC3-213ENST00000492506 B3GAT3O94766 335 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 ABLIM3O94929 683 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 SPATA31C1P0DKV0 1188 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms