RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CHKAP35790 457 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 NSFP46459 744 aaKnown RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 PMS2P54278 862 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 RWDD2BP57060 319 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 TAS2R40P59535 323 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 PPP1R7Q15435 360 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 SGO2Q562F6 1265 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 CCDC114Q96M63 670 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 NAP1L3Q99457 506 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-220ENST00000492280 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 ELP3Q9H9T3 547 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
HMGN1-220ENST00000492280 PTPRFP10586 1907 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 THAP12O43422 761 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 PPFIA2O75334 1257 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 USP2O75604 605 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 FARP2O94887 1054 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 GARTP22102 1010 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 GNA15P30679 374 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 HADHBP55084 474 aaKnown RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 ZFYVE27Q5T4F4 411 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 C15orf39Q6ZRI6 1047 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 ZNF473Q8WTR7 871 aaKnown RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 C12orf42Q96LP6 360 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 PORCNQ9H237 461 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 SLC12A6Q9UHW9 1150 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 WDR90Q96KV7 1748 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 IRF6O14896 467 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 CHRNA3P32297 505 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 GCNT1Q02742 428 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 KRT17Q04695 432 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 ADCY2Q08462 1091 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 GJC2Q5T442 439 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 KAZNQ674X7 775 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 NLRP14Q86W24 1093 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 MYCBPAPQ8TBZ2 947 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 HAUS1Q96CS2 278 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 RPS6KC1Q96S38 1066 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 TXLNGYQ9BZA5 131 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 RASSF4Q9H2L5 321 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 DHX33Q9H6R0 707 aaKnown RBP13.29□□□□□ -0.28
HMGN1-220ENST00000492280 ASIC3Q9UHC3 531 aa13.29□□□□□ -0.28
HMGN1-220ENST00000492280 RALAP11233 206 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 ACO1P21399 889 aaKnown RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 CUL2Q13617 745 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 PRPF31Q8WWY3 499 aaKnown RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 HVCN1Q96D96 273 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 CCT8L2Q96SF2 557 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 CTNNAL1Q9UBT7 734 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 MAFBQ9Y5Q3 323 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 NFASCO94856 1347 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 B4GALT5O43286 388 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 MTMR3Q13615 1198 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 PSMD6Q15008 389 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 DENND2CQ68D51 928 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-220ENST00000492280 THNSL1Q8IYQ7 743 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 PPP1R13LQ8WUF5 828 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 C17orf75Q9HAS0 396 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 TJP2Q9UDY2 1190 aa13.28□□□□□ -0.28
HMGN1-220ENST00000492280 C19orf81C9J6K1 198 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 MAFGO15525 162 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 ATP2C2O75185 946 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 MTA2O94776 668 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 WEE2P0C1S8 567 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 KRT10P13645 584 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 CORO7P57737 925 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 SNRPFP62306 86 aaKnown RBP13.27□□□□□ -0.28
HMGN1-220ENST00000492280 PPP2R2AP63151 447 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 LONRF1Q17RB8 773 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.28
HMGN1-220ENST00000492280 XRRA1Q6P2D8 792 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 TMEM192Q8IY95 271 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 MICALL1Q8N3F8 863 aa13.27□□□□□ -0.28
HMGN1-220ENST00000492280 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms