RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 GZF1Q9H116 711 aaPredicted RBP16.5■□□□□ 0.23
SS18L1-204ENST00000491916 IGFLR1Q9H665 355 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 ASB7Q9H672 318 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 TLE6Q9H808 572 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 RXFP1Q9HBX9 757 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 DMAC2Q9NW81 257 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 HSPBP1Q9NZL4 362 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 STK39Q9UEW8 545 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 COG5Q9UP83 839 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 DERAQ9Y315 318 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 PCDHA5Q9Y5H7 936 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 PPEF2O14830 753 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 B3GAT3O94766 335 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 CNPP09543 421 aaKnown RBP16.49■□□□□ 0.23
SS18L1-204ENST00000491916 SCN1AP35498 2009 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 BRCC3P46736 316 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
SS18L1-204ENST00000491916 SKIV2LQ15477 1246 aaKnown RBP16.49■□□□□ 0.23
SS18L1-204ENST00000491916 RTP2Q5QGT7 225 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 TMEM184AQ6ZMB5 413 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 CBWD2Q8IUF1 395 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 SLC22A17Q8WUG5 538 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 DDX27Q96GQ7 796 aaKnown RBP16.49■□□□□ 0.23
SS18L1-204ENST00000491916 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 FAM84AQ96KN4 292 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 KLHL5Q96PQ7 755 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 CDCA3Q99618 268 aaPredicted RBP16.49■□□□□ 0.23
SS18L1-204ENST00000491916 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 UBQLN1Q9UMX0 589 aaKnown RBP16.49■□□□□ 0.23
SS18L1-204ENST00000491916 C2CD2Q9Y426 696 aa16.49■□□□□ 0.23
SS18L1-204ENST00000491916 SF3B1O75533 1304 aaKnown RBP eCLIP16.48■□□□□ 0.238e-6■■■■■ 107
SS18L1-204ENST00000491916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 I3L4J1 428 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 KIAA0391O15091 583 aaKnown RBP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 NCK2O43639 380 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 FGFR3P22607 806 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 AARSP49588 968 aaKnown RBP eCLIP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 USP41Q3LFD5 358 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 GPR65Q8IYL9 337 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 SMYD4Q8IYR2 804 aaPredicted RBP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 PDE11AQ9HCR9 933 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 CLDND1Q9NY35 253 aa16.48■□□□□ 0.23
SS18L1-204ENST00000491916 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
SS18L1-204ENST00000491916 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 PIRO00625 290 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 C2CD2LO14523 706 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 IL18RAPO95256 599 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 BMP6P22004 513 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 GLUD2P49448 558 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 TMEM132DQ14C87 1099 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 ZCWPW2Q504Y3 356 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 FAM171A1Q5VUB5 890 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 C9orf57Q5W0N0 161 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 SLC9A9Q8IVB4 645 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 GUF1Q8N442 669 aaKnown RBP16.47■□□□□ 0.23
SS18L1-204ENST00000491916 LNX1Q8TBB1 728 aaPredicted RBP16.47■□□□□ 0.23
SS18L1-204ENST00000491916 FEZF2Q8TBJ5 459 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 PLEKHO2Q8TD55 490 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
SS18L1-204ENST00000491916 MRPL17Q9NRX2 175 aaKnown RBP16.47■□□□□ 0.23
SS18L1-204ENST00000491916 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
SS18L1-204ENST00000491916 MAPK8IP1Q9UQF2 711 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 TRAF3IP3Q9Y228 551 aa16.47■□□□□ 0.23
SS18L1-204ENST00000491916 PLXNA3P51805 1871 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 H3BQ06 376 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 PDXKO00764 312 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 SPTLC1O15269 473 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 TEX28O15482 410 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 BMP1P13497 986 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 KCNA5P22460 613 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 CYP2J2P51589 502 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 KCNQ1P51787 676 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 MRPL58Q14197 206 aaKnown RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 LEXMQ3ZCV2 418 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 COBLL1Q53SF7 1204 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 PRSS55Q6UWB4 352 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 RSPO2Q6UXX9 243 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 PIK3R5Q8WYR1 880 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 PPP2R3CQ969Q6 453 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 BORCS6Q96GS4 357 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 SUSD3Q96L08 255 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 ASB2Q96Q27 587 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 TTPALQ9BTX7 342 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 FNIP2Q9P278 1114 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 BARX2Q9UMQ3 279 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-204ENST00000491916 HCFC2Q9Y5Z7 792 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 TTC28Q96AY4 2481 aa16.46■□□□□ 0.23
SS18L1-204ENST00000491916 ZNF233A6NK53 670 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms