RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 NDRG2Q9UN36 371 aaKnown RBP14.59□□□□□ -0.07
USF1-206ENST00000491629 DENND4CQ5VZ89 1909 aa14.58□□□□□ -0.07
USF1-206ENST00000491629 ACKR2O00590 384 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 B3GAT3O94766 335 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 REC8O95072 547 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 ADRB1P08588 477 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 PTPN2P17706 415 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 ATP2B1P20020 1258 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 HOXC13P31276 330 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 DMWDQ09019 674 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 PRPF4BQ13523 1007 aaKnown RBP14.58□□□□□ -0.08
USF1-206ENST00000491629 SLC8B1Q6J4K2 584 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 VITQ6UXI7 678 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 MAMSTRQ6ZN01 415 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 RTL10Q7L3V2 364 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 MAP4K3Q8IVH8 894 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 CEP120Q8N960 986 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 DNASE1L2Q92874 299 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 KIFC3Q9BVG8 833 aa14.58□□□□□ -0.08
USF1-206ENST00000491629 BTBD18B2RXH4 712 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 NCAM2O15394 837 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 MEFVO15553 781 aaPredicted RBP14.57□□□□□ -0.08
USF1-206ENST00000491629 SDHBP21912 280 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 KRT2P35908 639 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 ALKAL1Q6UXT8 129 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 ZBTB8OSQ8IWT0 167 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 MCPH1Q8NEM0 835 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 ZNF461Q8TAF7 563 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 CCDC43Q96MW1 224 aaKnown RBP14.57□□□□□ -0.08
USF1-206ENST00000491629 ASB16Q96NS5 453 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 CORO1BQ9BR76 489 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 FAM126AQ9BYI3 521 aaPredicted RBP14.57□□□□□ -0.08
USF1-206ENST00000491629 ZNF334Q9HCZ1 680 aaPredicted RBP14.57□□□□□ -0.08
USF1-206ENST00000491629 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
USF1-206ENST00000491629 ZZEF1O43149 2961 aa14.57□□□□□ -0.08
USF1-206ENST00000491629 SMIM28A0A1B0GU29 152 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 ARNTLO00327 626 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 NEMFO60524 1076 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 CDKL5O76039 1030 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 LARGE1O95461 756 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 XBP1P17861 261 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 LIG1P18858 919 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 SATB1Q01826 763 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 MRPL58Q14197 206 aaKnown RBP14.56□□□□□ -0.08
USF1-206ENST00000491629 MAPK6Q16659 721 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 ANKS3Q6ZW76 656 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 TCEAL8Q8IYN2 117 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 HS6ST3Q8IZP7 471 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 TMEM130Q8N3G9 435 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 SECISBP2LQ93073 1101 aaKnown RBP14.56□□□□□ -0.08
USF1-206ENST00000491629 RSPRY1Q96DX4 576 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 ZMAT2Q96NC0 199 aaKnown RBP14.56□□□□□ -0.08
USF1-206ENST00000491629 C2orf40Q9H1Z8 148 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 BRD9Q9H8M2 597 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 LMAN1LQ9HAT1 526 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 CEP72Q9P209 647 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 MRPS17Q9Y2R5 130 aaKnown RBP14.56□□□□□ -0.08
USF1-206ENST00000491629 WDFY3Q8IZQ1 3526 aa14.56□□□□□ -0.08
USF1-206ENST00000491629 SLC30A4O14863 429 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 EPB41L2O43491 1005 aaKnown RBP14.55□□□□□ -0.08
USF1-206ENST00000491629 HRO43593 1189 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 GDF9O60383 454 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 CHRNB1P11230 501 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 ATF2P15336 505 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 GJA1P17302 382 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 CYP11B2P19099 503 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 VIPR2P41587 438 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 SRSF5Q13243 272 aaKnown RBP14.55□□□□□ -0.08
USF1-206ENST00000491629 ECM1Q16610 540 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 XKR4Q5GH76 650 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 LAIR1Q6GTX8 287 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 PADI6Q6TGC4 694 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 ADPGKQ9BRR6 497 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 TRMT61BQ9BVS5 477 aaKnown RBP14.55□□□□□ -0.08
USF1-206ENST00000491629 ZFP14Q9HCL3 533 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 TRPV5Q9NQA5 729 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 GMEB2Q9UKD1 530 aa14.55□□□□□ -0.08
USF1-206ENST00000491629 ZNF638Q14966 1978 aaKnown RBP14.54□□□□□ -0.08
USF1-206ENST00000491629 MAN2B1O00754 1011 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 MICAL2O94851 1124 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 VNN2O95498 520 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 LRG1P02750 347 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 GDI1P31150 447 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 NAMPTP43490 491 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 DCAF4L1Q3SXM0 396 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 ATF7IP2Q5U623 682 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 CELF5Q8N6W0 485 aaKnown RBP14.54□□□□□ -0.08
USF1-206ENST00000491629 NECAB1Q8N987 351 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 FAM3CQ92520 227 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 SMARCD2Q92925 531 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 UROC1Q96N76 676 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 NACC1Q96RE7 527 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 POLR3CQ9BUI4 534 aaPredicted RBP14.54□□□□□ -0.08
USF1-206ENST00000491629 CYP4F11Q9HBI6 524 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 PTPRHQ9HD43 1115 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 TUFT1Q9NNX1 390 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 FBXL5Q9UKA1 691 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms