RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 CXCL16Q9H2A7 254 aa9.45□□□□□ -0.9
GABRE-211ENST00000491339 RPF1Q9H9Y2 349 aaKnown RBP9.45□□□□□ -0.9
GABRE-211ENST00000491339 MTRRQ9UBK8 725 aa9.45□□□□□ -0.9
GABRE-211ENST00000491339 UBQLN1Q9UMX0 589 aaKnown RBP9.45□□□□□ -0.9
GABRE-211ENST00000491339 TECTAO75443 2155 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 TMEM221A6NGB7 291 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 H7C4K7 107 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 M0R296 226 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SYN3O14994 580 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SPTLC2O15270 562 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 PPP6R2O75170 966 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 XYLBO75191 536 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
GABRE-211ENST00000491339 FGFR3P22607 806 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 TKTP29401 623 aaKnown RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 GBP2P32456 591 aaPredicted RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 ALCAMQ13740 583 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 PPM1LQ5SGD2 360 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SLFN12LQ6IEE8 588 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 ALKAL1Q6UXT8 129 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 TRIM67Q6ZTA4 783 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 CD302Q8IX05 232 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 LNX1Q8TBB1 728 aaPredicted RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 LRRC15Q8TF66 581 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 DDX12PQ92771 950 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 ST6GALNAC4Q9H4F1 302 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 MRPL44Q9H9J2 332 aaKnown RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 DOCK8Q8NF50 2099 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 ZMYND10O75800 440 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 C8AP07357 584 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SPATA31D3P0C874 917 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 ZSCAN22P10073 491 aaPredicted RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 IDEP14735 1019 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 NMT1P30419 496 aaKnown RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 HOXA9P31269 272 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 GTF2BQ00403 316 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 SEZ6Q53EL9 994 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 ZNF280DQ6N043 979 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 KANK3Q6NY19 840 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 SPATA31D4Q6ZUB0 917 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 USP49Q70CQ1 688 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 LINC00301Q8NCQ3 95 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 APPL2Q8NEU8 664 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 KCNG4Q8TDN1 519 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 CUEDC2Q9H467 287 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 WDR6Q9NNW5 1121 aaKnown RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
GABRE-211ENST00000491339 BACE2Q9Y5Z0 518 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 CDY1Q9Y6F8 540 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 MYO10Q9HD67 2058 aa9.44□□□□□ -0.9
GABRE-211ENST00000491339 ARHGEF37A1IGU5 675 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 CUTAO60888 179 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 RFPL2O75678 378 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 GCNT3O95395 438 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 F13A1P00488 732 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 MYBP10242 640 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 CYP3A5P20815 502 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 BRCC3P46736 316 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 SLC10A6Q3KNW5 377 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 GET4Q7L5D6 327 aaPredicted RBP9.43□□□□□ -0.9
GABRE-211ENST00000491339 CCDC65Q8IXS2 484 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 C3orf58Q8NDZ4 430 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 BEST2Q8NFU1 509 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 C18orf25Q96B23 403 aaPredicted RBP9.43□□□□□ -0.9
GABRE-211ENST00000491339 CLSTN3Q9BQT9 956 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 KCNH6Q9H252 994 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 TUBGCP4Q9UGJ1 667 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 TTC26A0AVF1 554 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 I3L4J1 428 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 ELF1P32519 619 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 OR1D2P34982 312 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 TNFSF9P41273 254 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 AMPD3Q01432 767 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 RAB33AQ14088 237 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 POSTNQ15063 836 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
GABRE-211ENST00000491339 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
GABRE-211ENST00000491339 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 ADALQ6DHV7 355 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 RTL10Q7L3V2 364 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 PDILTQ8N807 584 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
GABRE-211ENST00000491339 POMGNT1Q8WZA1 660 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 FAM122AQ96E09 287 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 SUSD3Q96L08 255 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 ACCSQ96QU6 501 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 MAGEF1Q9HAY2 307 aa9.43□□□□□ -0.9
GABRE-211ENST00000491339 OLFML3Q9NRN5 406 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms