RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 ITFG1Q8TB96 612 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 LRRC15Q8TF66 581 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 FGF13Q92913 245 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 FGF14Q92915 247 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 AK8Q96MA6 479 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 TBC1D17Q9HA65 648 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 ARHGEF3Q9NR81 526 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 KCNG1Q9UIX4 513 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 ANK1P16157 1881 aa14.91□□□□□ -0.02
COL6A3-211ENST00000491233 TSC2P49815 1807 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 STK25O00506 426 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 SYN3O14994 580 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 CXCL8P10145 99 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 RPL9P32969 192 aaKnown RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 MCM4P33991 863 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 MATR3P43243 847 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 NCKAP1LP55160 1127 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 UVSSAQ2YD98 709 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 SLC10A6Q3KNW5 377 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 PABPC1LQ4VXU2 614 aaKnown RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 ARSHQ5FYA8 562 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 LARP1BQ659C4 914 aaKnown RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 SLC8B1Q6J4K2 584 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 PARM1Q6UWI2 310 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 GPBP1Q86WP2 473 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 ING5Q8WYH8 240 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 BICD1Q96G01 975 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 CALML4Q96GE6 196 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 TBC1D32Q96NH3 1257 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 REEP2Q9BRK0 252 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 RPP25Q9BUL9 199 aaKnown RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 SLC2A4RGQ9NR83 387 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 LARSQ9P2J5 1176 aaKnown RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 DNMT3BQ9UBC3 853 aaKnown RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 TUBGCP4Q9UGJ1 667 aa14.9□□□□□ -0.02
COL6A3-211ENST00000491233 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
COL6A3-211ENST00000491233 WDR27A2RRH5 827 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 PROB1E7EW31 1015 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 H0YCG3 227 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 PRRG1O14668 218 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 CLDN3O15551 220 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 SLC26A4O43511 780 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 UBA7P41226 1012 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 NBL1P41271 181 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 ARPP19P56211 112 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 MCL1Q07820 350 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 DHX8Q14562 1220 aaKnown RBP14.89□□□□□ -0.03
COL6A3-211ENST00000491233 MTSS1LQ765P7 747 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 RTL10Q7L3V2 364 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 HAUS6Q7Z4H7 955 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 NPAS3Q8IXF0 933 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 TMEM130Q8N3G9 435 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 DTWD2Q8NBA8 298 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 SUSD3Q96L08 255 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 HAPLN2Q9GZV7 340 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 ODF2LQ9ULJ1 636 aa14.89□□□□□ -0.03
COL6A3-211ENST00000491233 PATJQ8NI35 1801 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 H7C4K7 107 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 K7ENM7 598 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 FAM13AO94988 1023 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 BMP15O95972 392 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 LRG1P02750 347 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 PLCG1P19174 1290 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 ELF1P32519 619 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 LIG4P49917 911 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 GRIN1Q05586 938 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 SPAG1Q07617 926 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 ANGPT1Q15389 498 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 ZNF280DQ6N043 979 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 BRAPQ7Z569 592 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 RASSF8Q8NHQ8 419 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 ZNF461Q8TAF7 563 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 KXD1Q9BQD3 176 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 BLOC1S4Q9NUP1 217 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 FBXL5Q9UKA1 691 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 KCNH3Q9ULD8 1083 aa14.88□□□□□ -0.03
COL6A3-211ENST00000491233 MRPS23Q9Y3D9 190 aaKnown RBP14.88□□□□□ -0.03
COL6A3-211ENST00000491233 ARHGEF37A1IGU5 675 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 VPS37CA5D8V6 355 aaPredicted RBP14.87□□□□□ -0.03
COL6A3-211ENST00000491233 PRR23AA6NEV1 266 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 HNRNPDLO14979 420 aaKnown RBP14.87□□□□□ -0.03
COL6A3-211ENST00000491233 TBC1D4O60343 1298 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 ABLIM3O94929 683 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 RHOP08100 348 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 CLTAP09496 248 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 TNFSF9P41273 254 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 GPC5P78333 572 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
COL6A3-211ENST00000491233 MCM6Q14566 821 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 KARSQ15046 597 aaKnown RBP14.87□□□□□ -0.03
COL6A3-211ENST00000491233 SF3A1Q15459 793 aaKnown RBP14.87□□□□□ -0.03
COL6A3-211ENST00000491233 SLC5A9Q2M3M2 681 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 CTXN3Q4LDR2 81 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 PHLDB3Q6NSJ2 640 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 ASCL5Q7RTU5 278 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 FRMD5Q7Z6J6 570 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 RAD54LQ92698 747 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 DDX12PQ92771 950 aa14.87□□□□□ -0.03
COL6A3-211ENST00000491233 KCNN1Q92952 543 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms