RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CHRNA1P02708 482 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 ITGB3P05106 788 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 MMEP08473 750 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 CFHP08603 1231 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 MCF2P10911 925 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 GNAT1P11488 350 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 PRKCIP41743 596 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 RAP1GAPP47736 663 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 C1orf127Q8N9H9 656 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 ERO1AQ96HE7 468 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 ZMAT2Q96NC0 199 aaKnown RBP14.98□□□□□ -0.01
SMPD4-219ENST00000491128 PSMB7Q99436 277 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 TRIM6Q9C030 488 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-219ENST00000491128 POLIQ9UNA4 740 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 PMM2O15305 246 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 KRT86O43790 486 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 CLTAP09496 248 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 HOXC8P31273 242 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 ACLYP53396 1101 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 TRPC3Q13507 836 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 MTFR1Q15390 333 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 C2CD6Q53TS8 623 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 LHX8Q68G74 356 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 PHLDB2Q86SQ0 1253 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 FAM228AQ86W67 206 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 FAM71AQ8IYT1 594 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 SHC3Q92529 594 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 ACAP3Q96P50 834 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 PCDHB18PQ96TA0 734 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 CELF4Q9BZC1 486 aaKnown RBP14.97□□□□□ -0.01
SMPD4-219ENST00000491128 SIX4Q9UIU6 781 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 SRGAP2O75044 1071 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 TNFAIP3P21580 790 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 CDH8P55286 799 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 ITGA7Q13683 1181 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 TMEM270Q6UE05 265 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 EPS8L1Q8TE68 723 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 TRPV6Q9H1D0 765 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 MYO6Q9UM54 1294 aa14.97□□□□□ -0.01
SMPD4-219ENST00000491128 UQCRHLA0A096LP55 91 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 UQCRHP07919 91 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 SLC27A1Q6PCB7 646 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 RNF180Q86T96 592 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 SLC30A5Q8TAD4 765 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 KIF12Q96FN5 646 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 AGPAT1Q99943 283 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 AGO3Q9H9G7 860 aaKnown RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 HMX1Q9NP08 348 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 CACNG4Q9UBN1 327 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 NOD1Q9Y239 953 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 PPEF2O14830 753 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 NCK2O43639 380 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 CHRNB2P17787 502 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 NCBP1Q09161 790 aaKnown RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 CUL2Q13617 745 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 WDR72Q3MJ13 1102 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 TWF2Q6IBS0 349 aaKnown RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 NOTUMQ6P988 496 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 PASD1Q8IV76 773 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 SECISBP2LQ93073 1101 aaKnown RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 ANKRD36BP1Q96IX9 119 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 UNC93B1Q9H1C4 597 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 PARP2Q9UGN5 583 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 PUF60Q9UHX1 559 aaKnown RBP14.96□□□□□ -0.01
SMPD4-219ENST00000491128 PCDHB4Q9Y5E5 795 aa14.96□□□□□ -0.01
SMPD4-219ENST00000491128 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 KPNA6O60684 536 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 TNNC2P02585 160 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 ATP1A1P05023 1023 aaKnown RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 GHRP10912 638 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 CYP11B1P15538 503 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 MRPS6P82932 125 aaKnown RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 SESTD1Q86VW0 696 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 SYT11Q9BT88 431 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 PACSIN2Q9UNF0 486 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 ST3GAL5Q9UNP4 418 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 BZW2Q9Y6E2 419 aaKnown RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 MROH7Q68CQ1 1323 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 KIF2AO00139 706 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 B4GALT4O60513 344 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 RECQL4O94761 1208 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 POLR2BP30876 1174 aaKnown RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 NAB2Q15742 525 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 ZNF699Q32M78 642 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 SERINC5Q86VE9 423 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 ARRDC4Q8NCT1 418 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 PXYLP1Q8TE99 480 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 XYLT2Q9H1B5 865 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
SMPD4-219ENST00000491128 NOCTQ9UK39 431 aaKnown RBP14.95□□□□□ -0.02
SMPD4-219ENST00000491128 ASS1P00966 412 aaKnown RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 ACO1P21399 889 aaKnown RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 IGFBP6P24592 240 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 GALCP54803 685 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 UBXN11Q5T124 520 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 TAF2Q6P1X5 1199 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms