RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 SMTNL1A8MU46 457 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 BECN2A8MW95 431 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 IKBKBO14920 756 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 GNA14O95837 355 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 ITGB3P05106 788 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 ATP1A3P13637 1013 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 MTIF2P46199 727 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 OR1G1P47890 313 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 CLCNKBP51801 687 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 MARSP56192 900 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 FRMD5Q7Z6J6 570 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 TMEM173Q86WV6 379 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 FAM114A1Q8IWE2 563 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 TRIM59Q8IWR1 403 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 C1orf127Q8N9H9 656 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 BCL7CQ8WUZ0 217 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 SLC35C1Q96A29 364 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 ELMO3Q96BJ8 720 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 ANKRD36BP1Q96IX9 119 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 C17orf80Q9BSJ5 609 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 CERS4Q9HA82 394 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 METTL14Q9HCE5 456 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 DPP3Q9NY33 737 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 MSRAQ9UJ68 235 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 DERAQ9Y315 318 aa11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 COL4A4P53420 1690 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-227ENST00000491104 SOX1O00570 391 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 PODXLO00592 558 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 NRP1O14786 923 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 XPOTO43592 962 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 LRRN2O75325 713 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 TNNC2P02585 160 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 C4BPAP04003 597 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 ITGB1P05556 798 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 GALTP07902 379 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 KRT19P08727 400 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 LAG3P18627 525 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 DNAJB2P25686 324 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 POLR2BP30876 1174 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 CTNNB1P35222 781 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 BCAR1P56945 870 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 TAP1Q03518 808 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 BIRC3Q13489 604 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 RAB30Q15771 203 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 CBWD6Q4V339 395 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 TCP11X2Q5H9J9 407 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 CBWD3Q5JTY5 395 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 CBWD5Q5RIA9 395 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 TRAPPC11Q7Z392 1133 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 NT5DC4Q86YG4 428 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 CACTINQ8WUQ7 758 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 RBSNQ9H1K0 784 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 SLC38A7Q9NVC3 462 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 MARCH5Q9NX47 278 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 SIX4Q9UIU6 781 aa11.63□□□□□ -0.55
CACNA1C-227ENST00000491104 A0A1W2PPC1 479 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 I3L4J1 428 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 PHACTR2O75167 634 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 CSPG5O95196 566 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 KIF4AO95239 1232 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 ZNF18P17022 549 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 CYP3A5P20815 502 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 LRPAP1P30533 357 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 BRCC3P46736 316 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 MXI1P50539 228 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 CLDN10P78369 228 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 KRT31Q15323 416 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 DUOXA2Q1HG44 320 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 C9orf57Q5W0N0 161 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 CD300LGQ6UXG3 332 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 C15orf39Q6ZRI6 1047 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 SV2AQ7L0J3 742 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 SLC39A11Q8N1S5 342 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 TAS1R2Q8TE23 839 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 TIFAQ96CG3 184 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 TMEM175Q9BSA9 504 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 TUBGCP2Q9BSJ2 902 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 VPS16Q9H269 839 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 AGAP1Q9UPQ3 857 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 FAN1Q9Y2M0 1017 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 TSC2P49815 1807 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 VWA8A3KMH1 1905 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 ATG2AQ2TAZ0 1938 aa11.62□□□□□ -0.55
CACNA1C-227ENST00000491104 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
CACNA1C-227ENST00000491104 GOLGA6L19H0YKK7 550 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms