RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 FAM177A1Q8N128 213 aaPredicted RBP16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 CELF5Q8N6W0 485 aaKnown RBP16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 ASB16Q96NS5 453 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 PPP1R10Q96QC0 940 aaKnown RBP16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 NAP1L4Q99733 375 aaKnown RBP16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 ZFP14Q9HCL3 533 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 BACE2Q9Y5Z0 518 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 HRO43593 1189 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 SEC24AO95486 1093 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 PTPN2P17706 415 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 CCNE1P24864 410 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 TXKP42681 527 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 SOX9P48436 509 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 NRLP54845 237 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 SOX4Q06945 474 aaPredicted RBP16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 PPP2R5DQ14738 602 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 UPP1Q16831 310 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 ANKS3Q6ZW76 656 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 PDZD4Q76G19 769 aaPredicted RBP16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 HS6ST3Q8IZP7 471 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 ZNF274Q96GC6 653 aaPredicted RBP16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 ADPGKQ9BRR6 497 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 CCDC113Q9H0I3 377 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 TTC12Q9H892 705 aaPredicted RBP16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 ZNF334Q9HCZ1 680 aaPredicted RBP16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 C2orf42Q9NWW7 574 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 PCDHA12Q9UN75 941 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 INSL5Q9Y5Q6 135 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 CYP46A1Q9Y6A2 500 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 TICRRQ7Z2Z1 1910 aa16.88■□□□□ 0.29
SCAMP3-208ENST00000490999 ARHGEF37A1IGU5 675 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 ATP2B1P20020 1258 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 ELF1P32519 619 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 FOSBP53539 338 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 CCDC6Q16204 474 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 MAPK6Q16659 721 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 FAM187BQ17R55 369 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 MAP4K3Q8IVH8 894 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 CEP120Q8N960 986 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 IRF7Q92985 503 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 SPEGQ15772 3267 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 STK36Q9NRP7 1315 aa16.87■□□□□ 0.29
SCAMP3-208ENST00000490999 SLC38A8A6NNN8 435 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 NEMFO60524 1076 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 CHRNB1P11230 501 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 MYL4P12829 197 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 PSMC3P17980 439 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 CXCL12P48061 93 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 CSRP2Q16527 193 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 SLC8B1Q6J4K2 584 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 ZNF461Q8TAF7 563 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 DEPTORQ8TB45 409 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 ZSCAN18Q8TBC5 510 aaPredicted RBP16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 SMARCD2Q92925 531 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 RSPRY1Q96DX4 576 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
SCAMP3-208ENST00000490999 ZZEF1O43149 2961 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 ACKR2O00590 384 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 LRP3O75074 770 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 MOSPD3O75425 235 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 MED24O75448 989 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 CDKL5O76039 1030 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 ABLIM3O94929 683 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 SPATA31C1P0DKV0 1188 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 XBP1P17861 261 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 KRT2P35908 639 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 OSTNP61366 133 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 TEAD2Q15562 447 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 DCAF4L1Q3SXM0 396 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 RTL10Q7L3V2 364 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 TTC8Q8TAM2 541 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 IER2Q9BTL4 223 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 SLITRK6Q9H5Y7 841 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 CEP72Q9P209 647 aa16.85■□□□□ 0.29
SCAMP3-208ENST00000490999 CNOT1A5YKK6 2376 aaKnown RBP16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ZFYVE26Q68DK2 2539 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 K7ESF4 209 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ARNTLO00327 626 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 PODXLO00592 558 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ZNF263O14978 683 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 TRAPPC3O43617 180 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ATF2P15336 505 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 TWF1Q12792 350 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 SF3A2Q15428 464 aaKnown RBP16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 AASDHQ4L235 1098 aaPredicted RBP16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 CYP4A22Q5TCH4 519 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 NT5DC1Q5TFE4 455 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ATF7IP2Q5U623 682 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 TXNDC11Q6PKC3 985 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 TCEAL8Q8IYN2 117 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms