RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 CD302Q8IX05 232 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 TMEM130Q8N3G9 435 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 SMRP1Q8NCR6 262 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 ADAMTS19Q8TE59 1207 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 CASP10Q92851 521 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 TSPAN18Q96SJ8 248 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-207ENST00000490696 UBE4BO95155 1302 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 TNFRSF10AO00220 468 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 TEX28O15482 410 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 MBTPS2O43462 519 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 SRGAP2BP0DMP2 458 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 IL9P15248 144 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 CYP3A5P20815 502 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 LRPAP1P30533 357 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 SMAD4Q13485 552 aaKnown RBP16.72■□□□□ 0.27
VPS26A-207ENST00000490696 BMT2Q1RMZ1 405 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 KMT5BQ4FZB7 885 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 ANKRD54Q6NXT1 300 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 SYCE2Q6PIF2 218 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 PPFIBP1Q86W92 1011 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 RIN2Q8WYP3 895 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-207ENST00000490696 TTPALQ9BTX7 342 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 ASB7Q9H672 318 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
VPS26A-207ENST00000490696 UBQLN1Q9UMX0 589 aaKnown RBP16.72■□□□□ 0.27
VPS26A-207ENST00000490696 VWA8A3KMH1 1905 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 NFICP08651 508 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 EPCAMP16422 314 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 HOXB8P17481 243 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 FGFR3P22607 806 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 KLRC2P26717 231 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 BRCC3P46736 316 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 CLCN4P51793 760 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 STK4Q13043 487 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 JADE1Q6IE81 842 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 ARMCX5Q6P1M9 558 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 PRSS55Q6UWB4 352 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 FMR1NBQ8N0W7 255 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 PIK3R5Q8WYR1 880 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 SAAL1Q96ER3 474 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 NECAB3Q96P71 396 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 FAM213AQ9BRX8 229 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 S1PR5Q9H228 398 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.71■□□□□ 0.27
VPS26A-207ENST00000490696 EXOC1Q9NV70 894 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 FNIP2Q9P278 1114 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 DERAQ9Y315 318 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 C2CD2Q9Y426 696 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 ANK1P16157 1881 aa16.71■□□□□ 0.27
VPS26A-207ENST00000490696 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 I3L4J1 428 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 XPOTO43592 962 aaKnown RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 TRAPPC3O43617 180 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 EXTL3O43909 919 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 LDHAP00338 332 aaKnown RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 RPN1P04843 607 aaKnown RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 ADH1AP07327 375 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 PLA2G5P39877 138 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 GUCY2FP51841 1108 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 WNT7BP56706 349 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 DPYDQ12882 1025 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 PSMD2Q13200 908 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 TMEM132DQ14C87 1099 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 SMAD2Q15796 467 aaKnown RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 SPATA1Q5VX52 437 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 BRSK2Q8IWQ3 736 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 ENGASEQ8NFI3 743 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-207ENST00000490696 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 CHMP5Q9NZZ3 219 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 FAM50BQ9Y247 325 aa16.7■□□□□ 0.26
VPS26A-207ENST00000490696 GOLGA8IPA6NC78 632 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 GOLGA8JA6NMD2 632 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 IL18RAPO95256 599 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 RPL17P18621 184 aaKnown RBP16.69■□□□□ 0.26
VPS26A-207ENST00000490696 TKTP29401 623 aaKnown RBP16.69■□□□□ 0.26
VPS26A-207ENST00000490696 CREMQ03060 361 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 PSMD5Q16401 504 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 GPD1LQ8N335 351 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 SUSD6Q92537 303 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 AGPAT3Q9NRZ7 376 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 DZANK1Q9NVP4 752 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 USP15Q9Y4E8 981 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms