RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 FOXK2Q01167 660 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 DSC1Q08554 894 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 RAD51AP2Q09MP3 1159 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 MAPK7Q13164 816 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 ORC2Q13416 577 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 FAM187BQ17R55 369 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 KIAA0319Q5VV43 1072 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 RINT1Q6NUQ1 792 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 FAM173BQ6P4H8 233 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 SLC27A1Q6PCB7 646 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 CD300LGQ6UXG3 332 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 TMC5Q6UXY8 1006 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 DTHD1Q6ZMT9 781 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 SPATA31D4Q6ZUB0 917 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 C1orf186Q6ZWK4 172 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 FBXL6Q8N531 539 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 CEP120Q8N960 986 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 CNNM3Q8NE01 707 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 MCPH1Q8NEM0 835 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 ERMNQ8TAM6 284 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 ZBTB45Q96K62 511 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 TMEM175Q9BSA9 504 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 NFKBIZQ9BYH8 718 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 POMKQ9H5K3 350 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 KANSL3Q9P2N6 904 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 SMC3Q9UQE7 1217 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 FAM50BQ9Y247 325 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 GDAQ9Y2T3 454 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 GIT1Q9Y2X7 761 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 TDRD15B5MCY1 1934 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 DOCK6Q96HP0 2047 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 CNTNAP2Q9UHC6 1331 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 SPTBN4Q9H254 2564 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 VWA3AA6NCI4 1184 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 CASTOR2A6NHX0 329 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 C2CD4DB7Z1M9 353 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 H0Y858 1186 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 H3BQV1 296 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ACKR2O00590 384 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 MEFVO15553 781 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 HIP1RO75146 1068 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 SOD2P04179 222 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ADH1AP07327 375 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 KLRC2P26717 231 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 AVPR2P30518 371 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 PEX3P56589 373 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ATP2C1P98194 919 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 PTK2Q05397 1052 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 NCBP1Q09161 790 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 PRPF4BQ13523 1007 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 NR6A1Q15406 480 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 NAB2Q15742 525 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ARSHQ5FYA8 562 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 FOXD4L5Q5VV16 416 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 LARP1BQ659C4 914 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 PRSS55Q6UWB4 352 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 LYPD4Q6UWN0 246 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 PALB2Q86YC2 1186 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 GLYCTKQ8IVS8 523 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ZBTB8OSQ8IWT0 167 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 RNF168Q8IYW5 571 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 TMEM105Q8N8V8 129 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 DEPTORQ8TB45 409 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 HASPINQ8TF76 798 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 CASP10Q92851 521 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 CCDC51Q96ER9 411 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 HERC2P3Q9BVR0 1158 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 TRIM6Q9C030 488 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ADAM7Q9H2U9 754 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 UBN1Q9NPG3 1134 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 PRMT7Q9NVM4 692 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 IRAK3Q9Y616 596 aa8.06□□□□□ -1.12
PRPF4B-208ENST00000490653 CCDC169A6NNP5 214 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 PROB1E7EW31 1015 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 K7ERI5 159 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 SLC16A4O15374 487 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 TEX28O15482 410 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 ADAM12O43184 909 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 RECQL4O94761 1208 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 ASGR2P07307 311 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 MUTP22033 750 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 NAMPTP43490 491 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 NPTX2P47972 431 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 CLCN4P51793 760 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 SLC12A3P55017 1021 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 OSTNP61366 133 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 SRSF11Q05519 484 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 SIGLEC14Q08ET2 396 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 CUL4AQ13619 759 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 PCBP1Q15365 356 aaKnown RBP eCLIP8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 MAPK6Q16659 721 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 TMEM132AQ24JP5 1023 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 SEZ6Q53EL9 994 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 GLRA4Q5JXX5 417 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 SPECC1Q5M775 1068 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 HYIQ5T013 277 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 KRT79Q5XKE5 535 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms