RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 UBA3Q8TBC4 463 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 SCYL1Q96KG9 808 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 SNTG2Q9NY99 539 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 ACKR2O00590 384 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 RTN2O75298 545 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 GTF2H1P32780 548 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 CASTOR2A6NHX0 329 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 ACO1P21399 889 aaKnown RBP15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 FXR1P51114 621 aaKnown RBP eCLIP15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 RAD51Q06609 339 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 ELOA2Q8IYF1 753 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 EPAS1Q99814 870 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 ADGRG1Q9Y653 693 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 CYB561D2O14569 222 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 SRGAP2O75044 1071 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 DNAJB2P25686 324 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 HSD17B4P51659 736 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 TAP1Q03518 808 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 CCDC6Q16204 474 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 TRAPPC11Q7Z392 1133 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 CCHCR1Q8TD31 782 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 MGARPQ8TDB4 240 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZNF384Q8TF68 577 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
ARHGEF39-205ENST00000490638 TBKBP1A7MCY6 615 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 I3L4J1 428 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 LRG1P02750 347 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 AKAP5P24588 427 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 PTGER2P43116 358 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 THOC5Q13769 683 aaKnown RBP15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 SLC27A1Q6PCB7 646 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 STKLD1Q8NE28 680 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 ADAM2Q99965 735 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 H3BRJ5 948 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 PSMD10O75832 226 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 GALCP54803 685 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 PLCD4Q9BRC7 762 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 TRPV2Q9Y5S1 764 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 HGSO14964 777 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 PMLP29590 882 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 GARSP41250 739 aaKnown RBP15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 SLC18A3Q16572 532 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 CENPPQ6IPU0 288 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 PARD3BQ8TEW8 1205 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 SPIRE2Q8WWL2 714 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 LRP6O75581 1613 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 HMGCRP04035 888 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 CCL23P55773 120 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 FYB2Q5VWT5 728 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 RAPH1Q70E73 1250 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 CCDC13Q8IYE1 715 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 PCDHB12Q9Y5F1 795 aa15.23■□□□□ 0.03
ARHGEF39-205ENST00000490638 KIAA0100Q14667 2235 aaKnown RBP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZC3H4Q9UPT8 1303 aaKnown RBP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 CCDC188H7C350 402 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 AKAP3O75969 853 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 DR1Q01658 176 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 CTXN3Q4LDR2 81 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SV2AQ7L0J3 742 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 ACOT1Q86TX2 421 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SP110Q9HB58 689 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 ENTPD7Q9NQZ7 604 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 RSPH14Q9UHP6 348 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 STX2P32856 288 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 RAB27AP51159 221 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 C2orf54Q08AI8 447 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 ELAVL2Q12926 359 aaKnown RBP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 CUL2Q13617 745 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 COL9A3Q14050 684 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 DCAF6Q58WW2 860 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 KLHDC7AQ5VTJ3 777 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZNF410Q86VK4 478 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 VPS52Q8N1B4 723 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 DDX50Q9BQ39 737 aaKnown RBP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 KLC2Q9H0B6 622 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SMYD2Q9NRG4 433 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SPATA31C2B4DYI2 1134 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 EBAG9O00559 213 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 CA12O43570 354 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SNHG28P0DPA3 235 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 BRD2P25440 801 aaKnown RBP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SNX17Q15036 470 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 GJB7Q6PEY0 223 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZPBP2Q6X784 338 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 TAS1R2Q8TE23 839 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 AFAP1L1Q8TED9 768 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 HAS1Q92839 578 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 DDX27Q96GQ7 796 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms