RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 SPTLC2O15270 562 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 TOM1L1O75674 476 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 CFHP08603 1231 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 KCNE1P15382 129 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 PAX3P23760 479 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 OR1D2P34982 312 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 CLCNKBP51801 687 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 HTR4Q13639 388 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 KARSQ15046 597 aaKnown RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 STK38Q15208 465 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 TMEM119Q4V9L6 283 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 ALKAL1Q6UXT8 129 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 RSPO2Q6UXX9 243 aaPredicted RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 GRASPQ7Z6J2 395 aaPredicted RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 DTWD2Q8NBA8 298 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 ZNF461Q8TAF7 563 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 LRRC15Q8TF66 581 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 NKD2Q969F2 451 aaPredicted RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 CDT1Q9H211 546 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 PLEKHA5Q9HAU0 1116 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 PTPRHQ9HD43 1115 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 AVENQ9NQS1 362 aaPredicted RBP11.32□□□□□ -0.6
TTC28-207ENST00000490475 GDE1Q9NZC3 331 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 NUB1Q9Y5A7 615 aa11.32□□□□□ -0.6
TTC28-207ENST00000490475 ZNF197O14709 1029 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 LRG1P02750 347 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 PLA2G4BP0C869 781 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 PLS3P13797 630 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 NPR3P17342 541 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 PROZP22891 400 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 MAGEA9P43362 315 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 PRKCQQ04759 706 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 DNM1Q05193 864 aaKnown RBP11.31□□□□□ -0.6
TTC28-207ENST00000490475 RAD51AP2Q09MP3 1159 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
TTC28-207ENST00000490475 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
TTC28-207ENST00000490475 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
TTC28-207ENST00000490475 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 SLC8B1Q6J4K2 584 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
TTC28-207ENST00000490475 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
TTC28-207ENST00000490475 KCNN1Q92952 543 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 CALML4Q96GE6 196 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 SNX27Q96L92 541 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 TBC1D17Q9HA65 648 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 ARHGEF3Q9NR81 526 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 CNTN3Q9P232 1028 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 ODF2LQ9ULJ1 636 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 NUMBLQ9Y6R0 609 aa11.31□□□□□ -0.6
TTC28-207ENST00000490475 NPHP3-ACAD11A0A0J9YXS1 232 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 SFI1A8K8P3 1242 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 PODXLO00592 558 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 CLDN3O15551 220 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 MICAL2O94851 1124 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 MYBP10242 640 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 ATF2P15336 505 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 PLCG1P19174 1290 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 FOXK2Q01167 660 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 MCM6Q14566 821 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 ANGPT1Q15389 498 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 DAW1Q8N136 415 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 LEMD2Q8NC56 503 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 RSAD2Q8WXG1 361 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 FGF13Q92913 245 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 NELL2Q99435 816 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 TARS2Q9BW92 718 aaKnown RBP11.3□□□□□ -0.6
TTC28-207ENST00000490475 OSBPL6Q9BZF3 934 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 BLOC1S4Q9NUP1 217 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 CACNG4Q9UBN1 327 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 DOCK6Q96HP0 2047 aa11.3□□□□□ -0.6
TTC28-207ENST00000490475 KRBA1A5PL33 1030 aa11.29□□□□□ -0.6
TTC28-207ENST00000490475 PRR23AA6NEV1 266 aa11.29□□□□□ -0.6
TTC28-207ENST00000490475 PRRG1O14668 218 aa11.29□□□□□ -0.6
TTC28-207ENST00000490475 SLC16A4O15374 487 aa11.29□□□□□ -0.6
TTC28-207ENST00000490475 NCAM2O15394 837 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms