RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	CEP95	Q96GE4	821 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ZNF512	Q96ME7	567 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	FAM193B	Q96PV7	902 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	DMRTA2	Q96SC8	542 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	TMX4	Q9H1E5	349 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	BCO1	Q9HAY6	547 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	GPRC5D	Q9NZD1	345 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	TCEAL9	Q9UHQ7	104 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	FZD1	Q9UP38	647 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	LUC7L2	Q9Y383	392 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ZMYM3	Q14202	1370 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	CCDC189	A1A4V9	331 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	GRID2IP	A4D2P6	1211 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	NRP1	O14786	923 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	HOXA3	O43365	443 aa	Predicted RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ANP32C	O43423	234 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	AKR1B10	O60218	316 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	PHF2	O75151	1096 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	RECQL4	O94761	1208 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	GAST	P01350	101 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	AMY1A	P04745	511 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	GYPE	P15421	78 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	GNAT2	P19087	354 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ADSL	P30566	484 aa	Predicted RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	CLK3	P49761	638 aa	Known RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	FXR1	P51114	621 aa	Known RBP eCLIP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ATP8B2	P98198	1209 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	DSC2	Q02487	901 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	LMOD3	Q0VAK6	560 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ACAP2	Q15057	778 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	LRRC41	Q15345	812 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	FAM214A	Q32MH5	1076 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	PRR16	Q569H4	304 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	MFSD14B	Q5SR56	506 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	PRAMEF14	Q5SWL7	426 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	KCNV1	Q6PIU1	500 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	HTR3D	Q70Z44	454 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	GPRIN1	Q7Z2K8	1008 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ZNF572	Q7Z3I7	529 aa	Predicted RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	PNMA8A	Q86V59	439 aa	Predicted RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ZGPAT	Q8N5A5	531 aa	Known RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ZNF366	Q8N895	744 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	REPS2	Q8NFH8	660 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	MDGA1	Q8NFP4	955 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	CPT1C	Q8TCG5	803 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ST8SIA2	Q92186	375 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	NUP88	Q99567	741 aa	Predicted RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	ADI1	Q9BV57	179 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	MLST8	Q9BVC4	326 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	LSM14B	Q9BX40	385 aa	Known RBP	3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	R3HDML	Q9H3Y0	253 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	AASDHPPT	Q9NRN7	309 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	MRFAP1	Q9Y605	127 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	EID1	Q9Y6B2	187 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	RPS6KL1	Q9Y6S9	549 aa		3.16	□□□□□ -1.9
PUM3-204	ENST00000490444	POLR2A	P24928	1970 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	E2F8	A0AVK6	867 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	CCDC154	A6NI56	674 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	KIAA0355	O15063	1070 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	B3GALT2	O43825	422 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	PLIN1	O60240	522 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	RFPL1	O75677	317 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	SNUPN	O95149	360 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	HSP90AA1	P07900	732 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	POU2F2	P09086	479 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	ALOX15	P16050	662 aa	Predicted RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	PCSK1	P29120	753 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	ECHS1	P30084	290 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	GZMK	P49863	264 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	KIF23	Q02241	960 aa	Predicted RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	DUSP2	Q05923	314 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	TARDBP	Q13148	414 aa	Known RBP eCLIP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	MTM1	Q13496	603 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	IL10RA	Q13651	578 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	NOMO1	Q15155	1222 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	TIGD2	Q4W5G0	525 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	RRP12	Q5JTH9	1297 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	GJC2	Q5T442	439 aa	Predicted RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	LRRC55	Q6ZSA7	311 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	DOK3	Q7L591	496 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	MDM1	Q8TC05	714 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	ANKS1A	Q92625	1134 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	NELL1	Q92832	810 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	HSPBAP1	Q96EW2	488 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	IL17RA	Q96F46	866 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	NAP1L4	Q99733	375 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	SENP7	Q9BQF6	1050 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	PDCD2L	Q9BRP1	358 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	PCGF6	Q9BYE7	350 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	CPEB1	Q9BZB8	566 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	EPC1	Q9H2F5	836 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	SLC12A5	Q9H2X9	1139 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	CYP4F11	Q9HBI6	524 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	GEMIN8	Q9NWZ8	242 aa	Known RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	ZIM2	Q9NZV7	527 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	IP6K2	Q9UHH9	426 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	FBXO9	Q9UK97	447 aa	Predicted RBP	3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	INTU	Q9ULD6	942 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	SORCS3	Q9UPU3	1222 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	DNM3	Q9UQ16	869 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms