RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DEPTORQ8TB45 409 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 WASF1Q92558 559 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 UROC1Q96N76 676 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 TRMT61BQ9BVS5 477 aaKnown RBP15.37■□□□□ 0.05
VARS-227ENST00000489979 ZFP14Q9HCL3 533 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 RALGAPA1Q6GYQ0 2036 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 WDR27A2RRH5 827 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 PRRG1O14668 218 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 ABLIM3O94929 683 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 ADRB1P08588 477 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 FDPSP14324 419 aaKnown RBP15.36■□□□□ 0.05
VARS-227ENST00000489979 CCR2P41597 374 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 ARPP19P56211 112 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 PPP2R5DQ14738 602 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 NT5DC1Q5TFE4 455 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 SLC8B1Q6J4K2 584 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 MAMSTRQ6ZN01 415 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 PRR23BQ6ZRT6 265 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 KIFC3Q9BVG8 833 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 TMEM60Q9H2L4 133 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 LMAN1LQ9HAT1 526 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 CYP4F11Q9HBI6 524 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 ZNF334Q9HCZ1 680 aaPredicted RBP15.36■□□□□ 0.05
VARS-227ENST00000489979 TUFT1Q9NNX1 390 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.36■□□□□ 0.05
VARS-227ENST00000489979 COL4A2P08572 1712 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 ZFHX4Q86UP3 3567 aa15.36■□□□□ 0.05
VARS-227ENST00000489979 BTBD18B2RXH4 712 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 ZNF197O14709 1029 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 CYP11B2P19099 503 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 GDI1P31150 447 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 NAMPTP43490 491 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 SOX4Q06945 474 aaPredicted RBP15.35■□□□□ 0.05
VARS-227ENST00000489979 ATF7IP2Q5U623 682 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 LAIR1Q6GTX8 287 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 PADI6Q6TGC4 694 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 PDZD4Q76G19 769 aaPredicted RBP15.35■□□□□ 0.05
VARS-227ENST00000489979 MAP4K3Q8IVH8 894 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 CELF5Q8N6W0 485 aaKnown RBP15.35■□□□□ 0.05
VARS-227ENST00000489979 FAM3CQ92520 227 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 IRF7Q92985 503 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 ASB16Q96NS5 453 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 IER2Q9BTL4 223 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 POLD4Q9HCU8 107 aa15.35■□□□□ 0.05
VARS-227ENST00000489979 CHD8Q9HCK8 2581 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 SMIM28A0A1B0GU29 152 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 ARHGEF35A5YM69 484 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 SLC30A4O14863 429 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 MICAL2O94851 1124 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 SEC24AO95486 1093 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 ATF2P15336 505 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 PSMC3P17980 439 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 CCR3P51677 355 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 FOSBP53539 338 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 SATB1Q01826 763 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 PPP2R5AQ15172 486 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 ST3GAL2Q16842 350 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 VITQ6UXI7 678 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 TCEAL8Q8IYN2 117 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 NETO1Q8TDF5 533 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 SMARCD2Q92925 531 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 POLR3CQ9BUI4 534 aaPredicted RBP15.34■□□□□ 0.05
VARS-227ENST00000489979 INSL5Q9Y5Q6 135 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 PIAS3Q9Y6X2 628 aa15.34■□□□□ 0.05
VARS-227ENST00000489979 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.33■□□□□ 0.04
VARS-227ENST00000489979 PODXLO00592 558 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 RETP07949 1114 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 VIPR2P41587 438 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 PPM1JQ5JR12 505 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 CYP4A22Q5TCH4 519 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 DIS3L2Q8IYB7 885 aaKnown RBP15.33■□□□□ 0.04
VARS-227ENST00000489979 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 CEP120Q8N960 986 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 IFT74Q96LB3 600 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 TRPV5Q9NQA5 729 aa15.33■□□□□ 0.04
VARS-227ENST00000489979 PDCD11Q14690 1871 aaKnown RBP15.33■□□□□ 0.04
VARS-227ENST00000489979 H7C4K7 107 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 ZNF263O14978 683 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 SYN3O14994 580 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 LRP3O75074 770 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 MOSPD3O75425 235 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 CHRNB1P11230 501 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 GJA1P17302 382 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 RPA1P27694 616 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 MCM7P33993 719 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 CXCL12P48061 93 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 EFNA5P52803 228 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 YARSP54577 528 aaKnown RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 OSTNP61366 133 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 SIM2Q14190 667 aaPredicted RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 MRPL58Q14197 206 aaKnown RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 GAS6Q14393 721 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 ALKAL1Q6UXT8 129 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 APBB1IPQ7Z5R6 666 aaPredicted RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 ELMOD1Q8N336 334 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 NECAB1Q8N987 351 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms