RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 CEBPBP17676 345 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 SDHBP21912 280 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 GRM5P41594 1212 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 PEX3P56589 373 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 ROR1Q01973 937 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 CYP4A22Q5TCH4 519 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 IQCEQ6IPM2 695 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 PDZD4Q76G19 769 aaPredicted RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 MAML2Q8IZL2 1156 aaPredicted RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 FAM184AQ8NB25 1140 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 DNASE1L2Q92874 299 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 ELSPBP1Q96BH3 223 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 CYP4F11Q9HBI6 524 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 POLD4Q9HCU8 107 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 ZSCAN32Q9NX65 697 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 LRWD1Q9UFC0 647 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 ZNF638Q14966 1978 aaKnown RBP11.39□□□□□ -0.59
CHKB-211ENST00000489453 TCHHQ07283 1943 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 ANK1P16157 1881 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 MAN2B1O00754 1011 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 SYN3O14994 580 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
CHKB-211ENST00000489453 MCM4P33991 863 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHKB-211ENST00000489453 PPP2R5DQ14738 602 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
CHKB-211ENST00000489453 SLC5A9Q2M3M2 681 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 CTXN3Q4LDR2 81 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 CCDC83Q8IWF9 413 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 C3orf58Q8NDZ4 430 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 APPL2Q8NEU8 664 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 ZNF461Q8TAF7 563 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 DRC1Q96MC2 740 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 ACAP3Q96P50 834 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 CDT1Q9H211 546 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 ZFP14Q9HCL3 533 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 KMT5AQ9NQR1 393 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 AVENQ9NQS1 362 aaPredicted RBP11.38□□□□□ -0.59
CHKB-211ENST00000489453 HEBP1Q9NRV9 189 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 GMEB2Q9UKD1 530 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 RAB23Q9ULC3 237 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 NDRG2Q9UN36 371 aaKnown RBP11.38□□□□□ -0.59
CHKB-211ENST00000489453 SMG5Q9UPR3 1016 aaKnown RBP11.38□□□□□ -0.59
CHKB-211ENST00000489453 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
CHKB-211ENST00000489453 F5P12259 2224 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 MCF2P10911 925 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 CPB1P15086 417 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHKB-211ENST00000489453 RPS9P46781 194 aaKnown RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 NPTX2P47972 431 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 SOX4Q06945 474 aaPredicted RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 ADCY1Q08828 1119 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 STRN3Q13033 797 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 GRM2Q14416 872 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 ECM1Q16610 540 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 KRT79Q5XKE5 535 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 TPGS2Q68CL5 300 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 TANGO2Q6ICL3 276 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 ZNF280DQ6N043 979 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 CEP120Q8N960 986 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 SUMF1Q8NBK3 374 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 CLDN23Q96B33 292 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 ZNF512Q96ME7 567 aaPredicted RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 ACO2Q99798 780 aaKnown RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 TRMT61BQ9BVS5 477 aaKnown RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 TARS2Q9BW92 718 aaKnown RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 PLA2G2FQ9BZM2 168 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 CDV3Q9UKY7 258 aaKnown RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 USP18Q9UMW8 372 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 RBM19Q9Y4C8 960 aaKnown RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 INSL5Q9Y5Q6 135 aa11.37□□□□□ -0.59
CHKB-211ENST00000489453 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
CHKB-211ENST00000489453 KIF26AQ9ULI4 1882 aaPredicted RBP11.36□□□□□ -0.59
CHKB-211ENST00000489453 COL4A2P08572 1712 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 HIP1RO75146 1068 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 ABLIM3O94929 683 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 MYL4P12829 197 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 ATF2P15336 505 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 KCNE1P15382 129 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 IGFBP6P24592 240 aaPredicted RBP11.36□□□□□ -0.59
CHKB-211ENST00000489453 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
CHKB-211ENST00000489453 NRLP54845 237 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 HMGN5P82970 282 aaKnown RBP11.36□□□□□ -0.59
CHKB-211ENST00000489453 TWF1Q12792 350 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
CHKB-211ENST00000489453 FAM78AQ5JUQ0 283 aa11.36□□□□□ -0.59
CHKB-211ENST00000489453 TSSK4Q6SA08 328 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms