RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 SNX29Q8TEQ0 813 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 SECISBP2LQ93073 1101 aaKnown RBP13.07□□□□□ -0.32
SFXN3-207ENST00000489434 MCRS1Q96EZ8 462 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 ACAP3Q96P50 834 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 ACO2Q99798 780 aaKnown RBP13.07□□□□□ -0.32
SFXN3-207ENST00000489434 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 KMT5AQ9NQR1 393 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 AVENQ9NQS1 362 aaPredicted RBP13.07□□□□□ -0.32
SFXN3-207ENST00000489434 PCDHGA2Q9Y5H1 932 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 NOTCH4Q99466 2003 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 ARHGEF37A1IGU5 675 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 LAD1O00515 517 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 PODXLO00592 558 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 LRRN2O75325 713 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 MCF2P10911 925 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 BRCC3P46736 316 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 ARPP19P56211 112 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 ROR1Q01973 937 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 CSTF1Q05048 431 aaKnown RBP13.06□□□□□ -0.32
SFXN3-207ENST00000489434 STRN3Q13033 797 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 PUM1Q14671 1186 aaKnown RBP eCLIP13.06□□□□□ -0.32
SFXN3-207ENST00000489434 CYP4A22Q5TCH4 519 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 TPGS2Q68CL5 300 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 IQCEQ6IPM2 695 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 TPRG1Q6ZUI0 275 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 DGLUCYQ7Z3D6 616 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 ELSPBP1Q96BH3 223 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
SFXN3-207ENST00000489434 CORO1BQ9BR76 489 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 CDT1Q9H211 546 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 CYP4F11Q9HBI6 524 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 LTB4R2Q9NPC1 389 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 NCDNQ9UBB6 729 aa13.06□□□□□ -0.32
SFXN3-207ENST00000489434 HIP1RO75146 1068 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 ABLIM3O94929 683 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 ATF2P15336 505 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 KCNE1P15382 129 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 CD72P21854 359 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
SFXN3-207ENST00000489434 SMTNP53814 917 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 PTGDRQ13258 359 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 ECM1Q16610 540 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 CTXN3Q4LDR2 81 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 MPZL3Q6UWV2 235 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 CD300LGQ6UXG3 332 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 PDZD4Q76G19 769 aaPredicted RBP13.05□□□□□ -0.32
SFXN3-207ENST00000489434 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
SFXN3-207ENST00000489434 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 APPL2Q8NEU8 664 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 DNASE1L2Q92874 299 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 RMDN1Q96DB5 314 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 BRD9Q9H8M2 597 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 ZFP14Q9HCL3 533 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 PTPRHQ9HD43 1115 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
SFXN3-207ENST00000489434 MAFFQ9ULX9 164 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.05□□□□□ -0.32
SFXN3-207ENST00000489434 NCOR2Q9Y618 2525 aa13.05□□□□□ -0.32
SFXN3-207ENST00000489434 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 MICAL2O94851 1124 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 HARSP12081 509 aaKnown RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 CEBPBP17676 345 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 SDHBP21912 280 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 IGFBP6P24592 240 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 MCM4P33991 863 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 RPS9P46781 194 aaKnown RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 SOX4Q06945 474 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 ADCY1Q08828 1119 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 ST3GAL1Q11201 340 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 SLC5A9Q2M3M2 681 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 ZNF280DQ6N043 979 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 C4orf32Q8N8J7 132 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 CEP120Q8N960 986 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 SUMF1Q8NBK3 374 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 LEMD2Q8NC56 503 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 IRF7Q92985 503 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 ZNF512Q96ME7 567 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 TRMT61BQ9BVS5 477 aaKnown RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 FAM126AQ9BYI3 521 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 ZSCAN32Q9NX65 697 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 ARHGAP28Q9P2N2 729 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 MTF2Q9Y483 593 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-207ENST00000489434 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 INSL5Q9Y5Q6 135 aa13.04□□□□□ -0.32
SFXN3-207ENST00000489434 SPTBN2O15020 2390 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 WDR27A2RRH5 827 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms